Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   D9C16_RS15980 Genome accession   NZ_CP032861
Coordinates   2954821..2955195 (+) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis subsp. subtilis strain N1-1     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 2949821..2960195
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C16_RS15960 (D9C16_15960) acdA 2950375..2951514 (+) 1140 WP_014481201.1 acyl-CoA dehydrogenase AcdA -
  D9C16_RS15965 (D9C16_15965) rpoE 2951697..2952203 (+) 507 WP_014481200.1 DNA-directed RNA polymerase subunit delta -
  D9C16_RS15970 (D9C16_15970) pyrG 2952445..2954052 (+) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  D9C16_RS15975 (D9C16_15975) ywjG 2954134..2954655 (-) 522 WP_014481199.1 DUF2529 domain-containing protein -
  D9C16_RS15980 (D9C16_15980) letA 2954821..2955195 (+) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  D9C16_RS15985 (D9C16_15985) fbaA 2955376..2956233 (+) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  D9C16_RS15990 (D9C16_15990) fsa 2956353..2956991 (+) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  D9C16_RS22575 - 2956991..2957128 (+) 138 WP_014481198.1 hypothetical protein -
  D9C16_RS15995 (D9C16_15995) murAB 2957369..2958658 (+) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  D9C16_RS16000 (D9C16_16000) glpX 2958689..2959654 (+) 966 WP_014481197.1 class II fructose-bisphosphatase -
  D9C16_RS16005 (D9C16_16005) - 2959869..2960030 (+) 162 WP_003227632.1 hypothetical protein -

Sequence


Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=279670 D9C16_RS15980 WP_003227621.1 2954821..2955195(+) (letA) [Bacillus subtilis subsp. subtilis strain N1-1]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=279670 D9C16_RS15980 WP_003227621.1 2954821..2955195(+) (letA) [Bacillus subtilis subsp. subtilis strain N1-1]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCCCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363

  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363


Multiple sequence alignment