Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   D9C12_RS21675 Genome accession   NZ_CP032857
Coordinates   4037419..4037793 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis subsp. subtilis strain 2RL2-3     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 4032419..4042793
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C12_RS21650 (D9C12_21650) - 4032586..4032747 (-) 162 WP_003227632.1 hypothetical protein -
  D9C12_RS21655 (D9C12_21655) glpX 4032962..4033927 (-) 966 WP_014481197.1 class II fructose-bisphosphatase -
  D9C12_RS21660 (D9C12_21660) murAB 4033958..4035246 (-) 1289 Protein_4184 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  D9C12_RS23500 - 4035486..4035623 (-) 138 WP_014481198.1 hypothetical protein -
  D9C12_RS21665 (D9C12_21665) fsa 4035623..4036261 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  D9C12_RS21670 (D9C12_21670) fbaA 4036381..4037238 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  D9C12_RS21675 (D9C12_21675) letA 4037419..4037793 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  D9C12_RS21680 (D9C12_21680) ywjG 4037959..4038480 (+) 522 WP_014481199.1 DUF2529 domain-containing protein -
  D9C12_RS21690 (D9C12_21690) pyrG 4039875..4041482 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  D9C12_RS21695 (D9C12_21695) rpoE 4041724..4042230 (-) 507 WP_121509442.1 DNA-directed RNA polymerase subunit delta -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=279409 D9C12_RS21675 WP_003227621.1 4037419..4037793(-) (letA) [Bacillus subtilis subsp. subtilis strain 2RL2-3]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=279409 D9C12_RS21675 WP_003227621.1 4037419..4037793(-) (letA) [Bacillus subtilis subsp. subtilis strain 2RL2-3]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAAGAATCGAAGGAATTGGGCGCCCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363