Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   D9C11_RS09100 Genome accession   NZ_CP032855
Coordinates   1671907..1672281 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis subsp. subtilis strain PJ-7     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1666907..1677281
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D9C11_RS09075 (D9C11_09075) - 1667071..1667232 (-) 162 WP_003227632.1 hypothetical protein -
  D9C11_RS09080 (D9C11_09080) glpX 1667447..1668412 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  D9C11_RS09085 (D9C11_09085) murAB 1668443..1669732 (-) 1290 WP_121591248.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  D9C11_RS09090 (D9C11_09090) fsa 1670111..1670749 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  D9C11_RS09095 (D9C11_09095) fbaA 1670869..1671726 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  D9C11_RS09100 (D9C11_09100) letA 1671907..1672281 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  D9C11_RS09105 (D9C11_09105) ywjG 1672447..1672968 (+) 522 WP_015714876.1 DUF2529 domain-containing protein -
  D9C11_RS09110 (D9C11_09110) - 1673118..1674140 (+) 1023 Protein_1781 IS3 family transposase -
  D9C11_RS09115 (D9C11_09115) pyrG 1674196..1675803 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  D9C11_RS09120 (D9C11_09120) rpoE 1676045..1676551 (-) 507 WP_014481200.1 DNA-directed RNA polymerase subunit delta -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=279174 D9C11_RS09100 WP_003227621.1 1671907..1672281(-) (letA) [Bacillus subtilis subsp. subtilis strain PJ-7]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=279174 D9C11_RS09100 WP_003227621.1 1671907..1672281(-) (letA) [Bacillus subtilis subsp. subtilis strain PJ-7]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTTTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363