Detailed information
Bioinformatically predicted
Overview
| Name | recR | Type | Machinery gene |
| Locus tag | D9C10_RS20135 | Genome accession | NZ_CP032853 |
| Coordinates | 3710705..3711301 (+) | Length | 198 a.a. |
| NCBI ID | WP_003225425.1 | Uniprot ID | G4NT17 |
| Organism | Bacillus subtilis subsp. subtilis strain MH-1 | ||
| Function | homologous recombination (predicted from homology) Homologous recombination |
||
Genomic Context
Location: 3705705..3716301
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| D9C10_RS20105 (D9C10_20105) | sleL | 3705706..3706989 (-) | 1284 | WP_103330283.1 | glycoside hydrolase family 18 protein | - |
| D9C10_RS20110 (D9C10_20110) | yaaI | 3707059..3707604 (-) | 546 | WP_014478587.1 | isochorismatase family cysteine hydrolase | - |
| D9C10_RS20115 (D9C10_20115) | tadA | 3707690..3708175 (+) | 486 | WP_003226784.1 | tRNA adenosine(34) deaminase TadA | - |
| D9C10_RS20125 (D9C10_20125) | dnaX | 3708652..3710343 (+) | 1692 | WP_014478588.1 | DNA polymerase III subunit gamma/tau | - |
| D9C10_RS20130 (D9C10_20130) | ebfC | 3710367..3710690 (+) | 324 | WP_003225427.1 | YbaB/EbfC family nucleoid-associated protein | - |
| D9C10_RS20135 (D9C10_20135) | recR | 3710705..3711301 (+) | 597 | WP_003225425.1 | recombination protein RecR | Machinery gene |
| D9C10_RS20140 (D9C10_20140) | yaaL | 3711319..3711543 (+) | 225 | WP_003242387.1 | YaaL family protein | - |
| D9C10_RS20145 (D9C10_20145) | bofA | 3711610..3711873 (+) | 264 | WP_003225421.1 | sigma-K factor-processing regulator BofA | - |
Sequence
Protein
Download Length: 198 a.a. Molecular weight: 21974.53 Da Isoelectric Point: 5.3504
>NTDB_id=279095 D9C10_RS20135 WP_003225425.1 3710705..3711301(+) (recR) [Bacillus subtilis subsp. subtilis strain MH-1]
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSVCGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
MQYPEPISKLIDSFMKLPGIGPKTAVRLAFFVLGMKEDVVLDFAKALVNAKRNLTYCSVCGHITDQDPCYICEDTRRDKS
VICVVQDPKDVIAMEKMKEYNGQYHVLHGAISPMDGIGPEDIKIPELLKRLQDDQVTEVILATNPNIEGEATAMYISRLL
KPSGIKLSRIAHGLPVGGDLEYADEVTLSKALEGRREL
Nucleotide
Download Length: 597 bp
>NTDB_id=279095 D9C10_RS20135 WP_003225425.1 3710705..3711301(+) (recR) [Bacillus subtilis subsp. subtilis strain MH-1]
ATGCAATATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGATGTAGTATTAGATTTTGCGAAAGCATTAGTAAATGCGAAACGCAACC
TGACATATTGTTCAGTTTGCGGGCATATTACAGATCAGGACCCTTGCTATATATGTGAAGATACGCGCAGGGATAAGTCT
GTTATCTGTGTTGTGCAAGACCCTAAGGATGTTATCGCTATGGAGAAAATGAAGGAATACAACGGACAGTATCACGTTCT
TCACGGCGCTATTTCTCCAATGGACGGCATTGGACCGGAGGATATTAAAATACCAGAATTGTTAAAACGATTACAGGATG
ATCAAGTGACAGAAGTGATCCTCGCGACAAACCCTAATATAGAAGGGGAAGCAACGGCGATGTATATATCAAGGCTCCTC
AAGCCGTCTGGTATTAAGCTCTCCCGTATTGCCCACGGACTGCCCGTCGGCGGTGACTTGGAATATGCTGACGAGGTCAC
TCTTTCTAAAGCACTTGAAGGAAGACGCGAATTGTAA
ATGCAATATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATTGCCAGGGATCGGACCGAAAACAGCGGTTCG
TCTGGCTTTTTTTGTTCTAGGTATGAAAGAAGATGTAGTATTAGATTTTGCGAAAGCATTAGTAAATGCGAAACGCAACC
TGACATATTGTTCAGTTTGCGGGCATATTACAGATCAGGACCCTTGCTATATATGTGAAGATACGCGCAGGGATAAGTCT
GTTATCTGTGTTGTGCAAGACCCTAAGGATGTTATCGCTATGGAGAAAATGAAGGAATACAACGGACAGTATCACGTTCT
TCACGGCGCTATTTCTCCAATGGACGGCATTGGACCGGAGGATATTAAAATACCAGAATTGTTAAAACGATTACAGGATG
ATCAAGTGACAGAAGTGATCCTCGCGACAAACCCTAATATAGAAGGGGAAGCAACGGCGATGTATATATCAAGGCTCCTC
AAGCCGTCTGGTATTAAGCTCTCCCGTATTGCCCACGGACTGCCCGTCGGCGGTGACTTGGAATATGCTGACGAGGTCAC
TCTTTCTAAAGCACTTGAAGGAAGACGCGAATTGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| recR | Bacillus subtilis subsp. subtilis str. 168 |
100 |
100 |
1 |
| recR | Streptococcus pneumoniae R6 |
62.121 |
100 |
0.621 |
| recR | Deinococcus radiodurans R1 = ATCC 13939 = DSM 20539 |
52.041 |
98.99 |
0.515 |