Detailed information
Bioinformatically predicted
Overview
| Name | fimU | Type | Machinery gene |
| Locus tag | C7A15_RS03685 | Genome accession | NZ_CP027658 |
| Coordinates | 770778..771251 (-) | Length | 157 a.a. |
| NCBI ID | WP_016802756.1 | Uniprot ID | A0A1C2SAU9 |
| Organism | Acinetobacter pittii strain Ap-W20 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 765778..776251
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7A15_RS03670 (C7A15_03695) | pilX | 768417..769226 (-) | 810 | WP_002117088.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| C7A15_RS03675 (C7A15_03700) | pilW | 769223..770224 (-) | 1002 | WP_002116811.1 | PilW family protein | Machinery gene |
| C7A15_RS03680 (C7A15_03705) | pilV | 770224..770784 (-) | 561 | WP_080564113.1 | type IV pilus modification protein PilV | Machinery gene |
| C7A15_RS03685 (C7A15_03710) | fimU | 770778..771251 (-) | 474 | WP_016802756.1 | GspH/FimT family pseudopilin | Machinery gene |
| C7A15_RS03690 (C7A15_03715) | ispH | 771421..772371 (-) | 951 | WP_002116992.1 | 4-hydroxy-3-methylbut-2-enyl diphosphate reductase | - |
| C7A15_RS03695 (C7A15_03720) | gmk | 772494..773123 (+) | 630 | WP_002116973.1 | guanylate kinase | - |
| C7A15_RS03700 (C7A15_03725) | rpoZ | 773196..773474 (+) | 279 | WP_002116990.1 | DNA-directed RNA polymerase subunit omega | - |
| C7A15_RS03705 (C7A15_03730) | - | 773513..773668 (+) | 156 | Protein_711 | hypothetical protein | - |
| C7A15_RS03710 (C7A15_03735) | spoT | 773684..775789 (+) | 2106 | WP_002116807.1 | HD domain-containing protein | - |
Sequence
Protein
Download Length: 157 a.a. Molecular weight: 16939.62 Da Isoelectric Point: 7.7942
>NTDB_id=278710 C7A15_RS03685 WP_016802756.1 770778..771251(-) (fimU) [Acinetobacter pittii strain Ap-W20]
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKNQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNITQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
MRGIIPQDGFTLVELMVTIAVMAIIAMMAAPSMSNLLESKRLDGNQRDLINTLSEAKNQAILGRQDVSINLNSTALNTPT
SLNWKADSNNSLELKNIAADGTQSSLTATTLTFNANGVITNITQDTLLSICNSKINKKKILILTKLGTLIFKAEETC
Nucleotide
Download Length: 474 bp
>NTDB_id=278710 C7A15_RS03685 WP_016802756.1 770778..771251(-) (fimU) [Acinetobacter pittii strain Ap-W20]
ATGAGGGGAATTATTCCGCAAGACGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTCATGGCTATTATCGCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAACCAACGAGATCTAATCAATACTTTAT
CGGAAGCAAAGAACCAAGCCATACTTGGTCGACAAGATGTATCCATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAGCTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCATTAAC
AGCAACGACTCTAACTTTTAATGCGAATGGGGTGATAACCAATATTACCCAAGATACACTTTTATCTATTTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
ATGAGGGGAATTATTCCGCAAGACGGGTTCACCTTGGTTGAGCTTATGGTGACGATTGCGGTCATGGCTATTATCGCGAT
GATGGCTGCACCATCTATGTCGAATTTATTAGAAAGCAAACGACTAGATGGAAACCAACGAGATCTAATCAATACTTTAT
CGGAAGCAAAGAACCAAGCCATACTTGGTCGACAAGATGTATCCATTAATCTGAATTCAACAGCTTTAAATACTCCCACT
TCCTTGAATTGGAAAGCTGATTCCAATAACAGTCTTGAGCTTAAAAATATCGCTGCTGATGGTACGCAGAGTTCATTAAC
AGCAACGACTCTAACTTTTAATGCGAATGGGGTGATAACCAATATTACCCAAGATACACTTTTATCTATTTGTAATTCAA
AAATAAATAAAAAGAAAATTCTTATTTTAACAAAGCTTGGCACATTAATTTTTAAAGCTGAGGAGACATGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| fimU | Acinetobacter baumannii D1279779 |
87.898 |
100 |
0.879 |