Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   C7A17_RS07970 Genome accession   NZ_CP027657
Coordinates   1730322..1730729 (-) Length   135 a.a.
NCBI ID   WP_003458788.1    Uniprot ID   W6QSF7
Organism   Ectopseudomonas mendocina strain NEB698     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 1725322..1735729
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C7A17_RS07950 (C7A17_07950) - 1726285..1727145 (-) 861 WP_106742803.1 protein-glutamate O-methyltransferase -
  C7A17_RS07955 (C7A17_07955) - 1727206..1729242 (-) 2037 WP_106737530.1 methyl-accepting chemotaxis protein -
  C7A17_RS07960 (C7A17_07960) - 1729327..1729863 (-) 537 WP_106737531.1 chemotaxis protein CheW -
  C7A17_RS07965 (C7A17_07965) pilH 1729909..1730274 (-) 366 WP_013713612.1 twitching motility response regulator PilH -
  C7A17_RS07970 (C7A17_07970) pilG 1730322..1730729 (-) 408 WP_003458788.1 twitching motility response regulator PilG Regulator
  C7A17_RS07975 (C7A17_07975) gshB 1730971..1731921 (+) 951 WP_106737532.1 glutathione synthase -
  C7A17_RS07980 (C7A17_07980) - 1732129..1733025 (+) 897 WP_106737533.1 energy transducer TonB -
  C7A17_RS07985 (C7A17_07985) - 1733201..1733770 (+) 570 WP_106737534.1 YqgE/AlgH family protein -
  C7A17_RS07990 (C7A17_07990) ruvX 1733767..1734204 (+) 438 WP_106742806.1 Holliday junction resolvase RuvX -
  C7A17_RS07995 (C7A17_07995) pyrR 1734407..1734910 (+) 504 WP_106737535.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14771.13 Da        Isoelectric Point: 6.7123

>NTDB_id=278677 C7A17_RS07970 WP_003458788.1 1730322..1730729(-) (pilG) [Ectopseudomonas mendocina strain NEB698]
MEQHSEGLKVMVIDDSKTIRRTAETLLKKVGCDVITAVDGFDALAKIADTHPSIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPDFTPVEQAS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=278677 C7A17_RS07970 WP_003458788.1 1730322..1730729(-) (pilG) [Ectopseudomonas mendocina strain NEB698]
ATGGAACAGCATTCCGAGGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCGGAAACTCTGCT
GAAAAAAGTGGGTTGTGACGTCATCACCGCGGTCGATGGCTTCGATGCCCTGGCCAAGATTGCCGACACTCACCCCAGCA
TCATCTTTGTCGACATCATGATGCCGCGTCTCGATGGGTATCAGACCTGTGCCCTGATCAAGAACAACAGTGCTTTCAAA
TCCACTCCGGTGATCATGCTGTCCTCCAAGGATGGCCTGTTCGATAAAGCCAAGGGACGCATCGTCGGTTCCGATCAATA
CCTGACCAAACCTTTCAGCAAGGAAGAGTTGCTCGGTGCGATCAAAGCCCACGTGCCTGACTTCACTCCGGTGGAACAAG
CCTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB W6QSF7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

92.593

0.704

  vicR Streptococcus mutans UA159

42.857

93.333

0.4


Multiple sequence alignment