Detailed information
Bioinformatically predicted
Overview
| Name | pilY2 | Type | Machinery gene |
| Locus tag | AM481_RS05840 | Genome accession | NZ_CP027607 |
| Coordinates | 1225360..1225842 (+) | Length | 160 a.a. |
| NCBI ID | WP_001046420.1 | Uniprot ID | A0A7U3Y2Y6 |
| Organism | Acinetobacter baumannii strain AR_0102 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1220360..1230842
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| AM481_RS05830 (AM481_05830) | pilX | 1220663..1221481 (+) | 819 | WP_000149374.1 | PilX N-terminal domain-containing pilus assembly protein | Machinery gene |
| AM481_RS05835 (AM481_05835) | pilY1 | 1221493..1225347 (+) | 3855 | WP_000768970.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| AM481_RS05840 (AM481_05840) | pilY2 | 1225360..1225842 (+) | 483 | WP_001046420.1 | type IV pilin protein | Machinery gene |
| AM481_RS05845 (AM481_05845) | pilE | 1225839..1226264 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| AM481_RS05850 (AM481_05850) | rpsP | 1226411..1226662 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| AM481_RS05855 (AM481_05855) | rimM | 1226682..1227230 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| AM481_RS05860 (AM481_05860) | trmD | 1227276..1228016 (+) | 741 | WP_000464598.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| AM481_RS05865 (AM481_05865) | rplS | 1228225..1228593 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| AM481_RS05870 (AM481_05870) | - | 1228646..1229587 (-) | 942 | WP_085916958.1 | lipase family alpha/beta hydrolase | - |
| AM481_RS05875 (AM481_05875) | - | 1229702..1230736 (-) | 1035 | WP_001189447.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 160 a.a. Molecular weight: 17548.77 Da Isoelectric Point: 8.4817
>NTDB_id=278444 AM481_RS05840 WP_001046420.1 1225360..1225842(+) (pilY2) [Acinetobacter baumannii strain AR_0102]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNSASNGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ
Nucleotide
Download Length: 483 bp
>NTDB_id=278444 AM481_RS05840 WP_001046420.1 1225360..1225842(+) (pilY2) [Acinetobacter baumannii strain AR_0102]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTAGAACAGCATAAATCAAGAAATTTTACTTATAGGGGTTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAAATTACTGATGATACGACCACAGGTAATTTATTAACAAATTCTGCTTCTAATGGTCAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilY2 | Acinetobacter baumannii D1279779 |
97.5 |
100 |
0.975 |
| comE | Acinetobacter baylyi ADP1 |
40.116 |
100 |
0.431 |