Detailed information NTG0277942

Bioinformatically predicted

Overview

• Name: amiC
• Type: Regulator
• Locus tag: SPV_RS08900
• Genome accession: NZ_CP027540
• Coordinates: 1683419..1684915 (-)
• Length: 498 a.a.
• NCBI ID: WP_000759901.1
• Uniprot ID: P0A4M7
• Organism: Streptococcus pneumoniae strain D39V
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 1678419..1689915

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SPV_RS08880	-	1679099..1680405 (+)	1307	Protein_1682	transposase	-
SPV_RS08885 (SPV_1667)	amiF	1680480..1681406 (-)	927	WP_001291296.1	ATP-binding cassette domain-containing protein	Regulator
SPV_RS08890 (SPV_1668)	amiE	1681417..1682484 (-)	1068	WP_000159554.1	ABC transporter ATP-binding protein	Regulator
SPV_RS08895 (SPV_1669)	amiD	1682493..1683419 (-)	927	WP_000103700.1	oligopeptide ABC transporter permease OppC	Regulator
SPV_RS08900 (SPV_1670)	amiC	1683419..1684915 (-)	1497	WP_000759901.1	ABC transporter permease	Regulator
SPV_RS08905 (SPV_1671)	amiA3	1684982..1686961 (-)	1980	WP_000742232.1	peptide ABC transporter substrate-binding protein	Regulator
SPV_RS08915 (SPV_1672)	-	1687648..1688841 (-)	1194	WP_000835622.1	O-antigen ligase	-

Sequence

Protein

• Length: 498 a.a.
• Molecular weight: 55623.17 Da
• Isoelectric Point: 9.4436

>NTDB_id=277942 SPV_RS08900 WP_000759901.1 1683419..1684915(-) (amiC) [Streptococcus pneumoniae strain D39V]
MKKYIFMRVLRSLVSIFLVTTLTYTIIYTLVPRKLIFKQDPNYNKIATTADKRDNYENTVFERMGYIEYYDTKELQEKAS
SMDSSVTVEANATNKAIYEKYINQLGHGWTLGEFTESGQFYATREIPIFERVFHFYANLIDIDHTNKIQDPENPDLKRYL
RFENDPAIGWSLVGSGTKHKYLLYFNSQFPFVHQNFVNLNLGDSYPTYANTPVLQVITQGQGQTKTAQVQFPTGKKTSSV
NIYSRTYKSPSQADSREVASYGKDDPYTATESNYQYPSMIVSSAITGLIGLVLAYALAVPLGSAMARFKNTWIDSLSTGA
LTFLLALPTIALVYIVRLIGSSIALPDSFPILGAGDWRSYVLPAVILGLLGAPGTAIWIRRYMIDLQSQDFVRFARAKGL
SEKEISNKHIFKNAMVPLVSGIPAAIIGVIGGATLTETVFAFPGMGKMLIDSVKASNNSMVVGLVFIFTCISIFSRLLGD
IWMTIIDPRIKLTEKGGK

Nucleotide

• Length: 1497 bp

>NTDB_id=277942 SPV_RS08900 WP_000759901.1 1683419..1684915(-) (amiC) [Streptococcus pneumoniae strain D39V]
ATGAAAAAATATATTTTTATGCGTGTTTTGCGGTCATTGGTTTCGATTTTCTTAGTAACGACTTTGACCTACACGATTAT
CTATACCTTGGTTCCTCGAAAATTGATTTTCAAGCAGGATCCTAACTATAATAAAATTGCGACAACGGCTGATAAACGTG
ATAACTATGAAAATACTGTGTTTGAGCGTATGGGCTACATTGAGTATTACGATACTAAAGAGTTGCAAGAAAAGGCAAGT
AGCATGGATTCTTCTGTAACAGTAGAAGCAAATGCGACCAATAAAGCTATTTATGAAAAGTACATCAATCAATTAGGTCA
TGGTTGGACTTTGGGAGAATTTACTGAAAGTGGTCAATTCTATGCTACTCGTGAAATTCCAATTTTTGAACGTGTTTTTC
ACTTCTATGCTAACTTGATTGACATTGACCATACAAATAAAATCCAAGACCCTGAAAATCCAGACTTGAAACGCTACCTT
CGTTTTGAAAATGATCCAGCTATCGGATGGTCATTGGTCGGTTCAGGAACTAAACATAAATATCTCTTGTACTTTAACAG
TCAGTTCCCATTTGTTCATCAAAACTTTGTGAACTTGAATTTAGGTGACTCTTACCCAACCTATGCTAATACACCAGTTC
TTCAGGTTATTACTCAAGGTCAAGGACAAACCAAAACTGCCCAAGTTCAGTTCCCAACAGGTAAGAAAACGTCTTCTGTA
AATATTTACTCAAGAACCTACAAGTCACCTAGTCAGGCTGACTCTCGTGAAGTAGCTAGCTATGGGAAAGATGATCCTTA
TACAGCGACTGAAAGTAATTACCAATATCCATCTATGATTGTCAGCTCTGCTATTACTGGTTTGATTGGTTTGGTTCTTG
CCTATGCTCTTGCCGTGCCACTTGGTTCAGCCATGGCTCGTTTCAAGAACACTTGGATTGATAGCCTCTCAACAGGGGCT
TTGACCTTCTTGCTTGCTCTTCCAACGATTGCCTTGGTTTACATCGTTCGATTGATTGGATCATCTATTGCCCTTCCAGA
TTCATTCCCTATCTTGGGAGCTGGAGATTGGCGTTCTTACGTTTTACCAGCAGTCATCCTTGGTTTGTTGGGTGCTCCTG
GTACAGCCATTTGGATTCGTCGTTACATGATTGACTTGCAATCTCAAGACTTTGTTCGTTTCGCTCGTGCAAAAGGTTTG
TCTGAAAAAGAAATTTCAAACAAACACATCTTTAAAAATGCCATGGTTCCGCTGGTTTCAGGAATTCCTGCTGCCATTAT
TGGGGTTATCGGTGGTGCAACCCTTACTGAAACAGTCTTCGCCTTCCCAGGTATGGGTAAAATGTTGATTGACTCTGTAA
AAGCATCTAATAACTCTATGGTCGTTGGTCTTGTCTTCATCTTTACATGTATTTCTATCTTCTCACGTCTTTTGGGAGAT
ATTTGGATGACTATTATTGACCCACGTATTAAATTGACTGAGAAAGGAGGCAAATAA

Domains

Predicted by InterproScan.

• Binding-protein-dependent transport system inner membrane component (BPD_transp_1) (298-491)

3D structure

• AlphaFold DB: P0A4M7

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiC	Streptococcus salivarius strain HSISS4	77.309	100	0.773
amiC	Streptococcus thermophilus LMG 18311	77.108	100	0.771
amiC	Streptococcus thermophilus LMD-9	76.707	100	0.767