Detailed information    

insolico Bioinformatically predicted

Overview


Name   pptB   Type   Regulator
Locus tag   D8S76_RS07590 Genome accession   NZ_CP032699
Coordinates   1475633..1476667 (-) Length   344 a.a.
NCBI ID   WP_023078705.1    Uniprot ID   -
Organism   Streptococcus pyogenes strain TSPY155     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 1470633..1481667
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D8S76_RS07555 (D8S76_07550) - 1471409..1471711 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  D8S76_RS07560 (D8S76_07555) rnpM 1471704..1472000 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  D8S76_RS07565 (D8S76_07560) nusA 1472016..1473173 (-) 1158 WP_002988817.1 transcription termination factor NusA -
  D8S76_RS07570 (D8S76_07565) rimP 1473348..1473884 (-) 537 WP_002988815.1 ribosome maturation factor RimP -
  D8S76_RS07580 (D8S76_07575) trmB 1474143..1474778 (-) 636 WP_023078685.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  D8S76_RS07585 (D8S76_07580) ccrZ 1474778..1475569 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  D8S76_RS07590 (D8S76_07585) pptB 1475633..1476667 (-) 1035 WP_023078705.1 ABC transporter permease Regulator
  D8S76_RS07595 (D8S76_07590) pptA 1476670..1477395 (-) 726 WP_023078675.1 ABC transporter ATP-binding protein Regulator
  D8S76_RS07600 (D8S76_07595) - 1477467..1477886 (+) 420 WP_002983376.1 HIT family protein -
  D8S76_RS07605 (D8S76_07600) - 1477883..1478239 (+) 357 WP_009880754.1 hypothetical protein -
  D8S76_RS07610 (D8S76_07605) - 1478350..1479624 (-) 1275 WP_020837594.1 biofilm formation/cell division transcriptional regulator BrpA -
  D8S76_RS07615 (D8S76_07610) - 1479633..1480157 (-) 525 WP_023078656.1 GNAT family N-acetyltransferase -
  D8S76_RS07620 (D8S76_07615) tsaE 1480132..1480593 (-) 462 WP_009880751.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence


Protein


Download         Length: 344 a.a.        Molecular weight: 40265.51 Da        Isoelectric Point: 10.3713

>NTDB_id=277654 D8S76_RS07590 WP_023078705.1 1475633..1476667(-) (pptB) [Streptococcus pyogenes strain TSPY155]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNQFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=277654 D8S76_RS07590 WP_023078705.1 1475633..1476667(-) (pptB) [Streptococcus pyogenes strain TSPY155]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCAGTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTCTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

42.733

100

0.427

  pptB Streptococcus salivarius strain HSISS4

42.442

100

0.424


Multiple sequence alignment