Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   D6022_RS16745 Genome accession   NZ_CP032538
Coordinates   3142404..3143027 (+) Length   207 a.a.
NCBI ID   WP_003182222.1    Uniprot ID   Q65J42
Organism   Bacillus licheniformis strain MT-B06     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3137404..3148027
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D6022_RS16710 - 3137668..3137829 (+) 162 WP_229107189.1 aspartyl-phosphate phosphatase Spo0E family protein -
  D6022_RS16715 - 3137910..3138128 (-) 219 WP_003182236.1 YneF family protein -
  D6022_RS16720 sirA 3138213..3138650 (-) 438 WP_003182234.1 sporulation inhibitor of replication protein SirA -
  D6022_RS16725 recP/tkt 3138805..3140808 (-) 2004 WP_009328229.1 transketolase Machinery gene
  D6022_RS16730 - 3140975..3141208 (-) 234 WP_003182231.1 DUF896 domain-containing protein -
  D6022_RS16735 - 3141274..3141921 (-) 648 WP_003182227.1 recombinase family protein -
  D6022_RS16740 yneA 3141940..3142251 (-) 312 WP_003182225.1 cell division suppressor protein YneA -
  D6022_RS16745 dinR/lexA 3142404..3143027 (+) 624 WP_003182222.1 transcriptional repressor LexA Regulator
  D6022_RS16750 nucA/comI 3143223..3143651 (-) 429 WP_003182220.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  D6022_RS16755 - 3144010..3144849 (-) 840 WP_003182218.1 thymidylate synthase -
  D6022_RS16760 - 3144909..3145670 (-) 762 WP_003182215.1 hypothetical protein -
  D6022_RS16765 - 3145761..3146594 (-) 834 WP_003182213.1 prohibitin family protein -
  D6022_RS24010 - 3146587..3146727 (-) 141 WP_003182211.1 hypothetical protein -
  D6022_RS16770 wrbA 3147048..3147659 (-) 612 WP_003182210.1 NAD(P)H:quinone oxidoreductase -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23263.85 Da        Isoelectric Point: 5.3807

>NTDB_id=276647 D6022_RS16745 WP_003182222.1 3142404..3143027(+) (dinR/lexA) [Bacillus licheniformis strain MT-B06]
MTKLSKRQLDILRFIKEEVKRKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDTEEEIHIPKN
QVVNVPVIGKVTAGTPITAVENIEEYFPLPERLAPPDEHVFMLEIMGESMIDAGILDQDYVIVKQQNTANNGDIVVAMTE
DDEATVKRFFKEETHIRLQPENPTMEPIILQNVTILGKVIGVFRTVH

Nucleotide


Download         Length: 624 bp        

>NTDB_id=276647 D6022_RS16745 WP_003182222.1 3142404..3143027(+) (dinR/lexA) [Bacillus licheniformis strain MT-B06]
ATGACGAAGCTATCAAAAAGACAACTTGATATTTTGCGTTTCATTAAAGAAGAAGTGAAGCGCAAAGGCTATCCGCCTTC
CGTCAGGGAGATCGGAGAAGCGGTCGGCCTGGCGTCAAGTTCAACGGTACACGGCCACTTGGCAAGGCTTGAAACGAAGG
GATTGATCAGAAGGGATCCGACGAAGCCGAGAGCGATCGAAATTCTCGATACAGAGGAGGAAATTCATATTCCGAAAAAC
CAGGTTGTCAATGTCCCGGTCATCGGAAAGGTGACCGCCGGTACACCGATTACCGCAGTCGAAAACATCGAGGAATACTT
TCCGCTTCCCGAACGCCTGGCGCCGCCGGATGAGCACGTCTTCATGCTGGAGATCATGGGAGAAAGCATGATCGATGCCG
GAATTCTTGATCAAGATTATGTGATTGTCAAGCAGCAGAACACCGCAAACAACGGGGATATCGTCGTTGCGATGACCGAA
GACGACGAAGCGACTGTTAAGCGGTTTTTCAAGGAGGAAACCCATATCCGCCTTCAGCCGGAAAACCCGACGATGGAGCC
GATCATCCTTCAGAATGTGACGATTCTCGGAAAAGTCATCGGCGTTTTCCGCACTGTTCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-200)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65J42

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913