Detailed information NTG0276590

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: C6I29_RS00815
• Genome accession: NZ_CP027365
• Coordinates: 175742..177157 (-)
• Length: 471 a.a.
• NCBI ID: WP_005022966.1
• Uniprot ID: A0A062BUE5
• Organism: Acinetobacter radioresistens strain DSSKY-A-001
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 170742..182157

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C6I29_RS00800	lptG	171795..172865 (+)	1071	WP_005022957.1	LPS export ABC transporter permease LptG	-
C6I29_RS00805	gpmI	172984..174534 (+)	1551	WP_005022960.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
C6I29_RS00810	-	174554..175741 (+)	1188	WP_005022963.1	S41 family peptidase	-
C6I29_RS00815	pilR	175742..177157 (-)	1416	WP_005022966.1	sigma-54-dependent transcriptional regulator	Regulator
C6I29_RS00820	pilS	177182..178747 (-)	1566	WP_005022968.1	sensor histidine kinase	Regulator
C6I29_RS00825	-	178762..179397 (-)	636	WP_005017150.1	response regulator	-
C6I29_RS00830	pbpG	179616..180647 (+)	1032	WP_005017149.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
C6I29_RS00835	thrC	180735..181880 (-)	1146	WP_005017146.1	threonine synthase	-

Sequence

Protein

• Length: 471 a.a.
• Molecular weight: 52984.01 Da
• Isoelectric Point: 6.2750

>NTDB_id=276590 C6I29_RS00815 WP_005022966.1 175742..177157(-) (pilR) [Acinetobacter radioresistens strain DSSKY-A-001]
MTNQQALILLVDDEEDLCTLMQMSLAKINIRTHIAHGLEQAKKLFQQHAYDACLTDLNLPDGNGLELVHYVSQLYPCTPI
AVLTAYGNMEIAISALKAGAFDFVSKPVNQAHLQQLVQKALNTPQSAQQLVQDALENRMLIGTSLPIQQLKIALKKIARS
QAPVFITGESGTGKEVVANLVHRLSNRSDGPFIAINCGAIPGDLMESELFGHKKGSFTGASQDKQGLIYSAHGGSLFLDE
IAELPLAMQVKLLRAVQEKKIRPIGSDQEIDVDFRVISASHQDLEILVQQGKFRQDLFFRIHVMDIVLPPLREREDDILL
LAKHFIQEVCKEWDIPNKILTERGQQFLMQQYFPGNVRELRNIIERAITLSDNEYIDLPQLQSAPLRNVQNFVAGQINHE
PLTDQVIPLSPHRKIPAEGLEQYLENIEKEVLLTALNQTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTDDE

Nucleotide

• Length: 1416 bp

>NTDB_id=276590 C6I29_RS00815 WP_005022966.1 175742..177157(-) (pilR) [Acinetobacter radioresistens strain DSSKY-A-001]
ATGACAAATCAGCAGGCACTTATATTATTGGTCGATGATGAGGAAGACCTTTGTACTTTAATGCAAATGTCTTTGGCCAA
AATCAATATCAGGACCCACATTGCACATGGACTGGAGCAGGCAAAGAAACTTTTTCAGCAACATGCTTATGATGCCTGCC
TGACTGATCTGAATTTGCCAGATGGCAATGGGCTGGAATTAGTCCATTATGTTTCACAACTTTATCCTTGTACACCGATC
GCCGTTTTGACCGCCTATGGCAATATGGAAATTGCTATTTCAGCACTCAAGGCTGGAGCTTTTGATTTTGTCAGTAAACC
TGTCAATCAGGCCCATCTACAGCAACTGGTTCAAAAAGCACTCAATACGCCTCAATCGGCTCAGCAACTGGTTCAAGATG
CTTTGGAAAATCGGATGTTGATTGGCACTTCTTTGCCAATCCAGCAGCTCAAAATTGCCTTGAAAAAAATTGCCCGCTCA
CAGGCACCGGTTTTTATTACTGGTGAATCCGGTACAGGCAAGGAAGTAGTGGCTAATCTGGTGCATCGCTTAAGTAACCG
CAGTGACGGGCCATTTATTGCTATTAACTGTGGCGCTATTCCAGGCGATCTCATGGAAAGTGAGCTGTTTGGACACAAAA
AGGGAAGTTTTACCGGCGCAAGTCAGGACAAACAGGGACTAATTTATTCTGCCCATGGCGGTAGCTTGTTTCTGGATGAA
ATTGCTGAACTGCCTCTGGCCATGCAGGTTAAATTACTCCGTGCCGTACAGGAAAAGAAAATCCGTCCGATTGGTAGTGA
TCAGGAAATTGATGTGGATTTTCGTGTAATTAGTGCCAGTCATCAGGACCTGGAAATACTAGTACAGCAAGGTAAGTTCC
GGCAGGATCTCTTCTTTCGGATTCATGTCATGGATATTGTTCTGCCCCCCCTGCGTGAACGTGAAGATGACATTCTTCTG
CTGGCTAAACATTTTATTCAGGAAGTATGTAAGGAGTGGGATATTCCCAATAAAATTCTGACCGAGCGCGGCCAGCAATT
TCTGATGCAGCAATATTTTCCGGGGAATGTGCGTGAACTGCGTAATATTATCGAACGTGCGATCACATTAAGTGATAATG
AATATATTGATTTACCCCAACTACAAAGTGCACCTTTGCGCAATGTCCAAAATTTTGTAGCAGGCCAAATTAATCATGAA
CCGCTAACGGACCAAGTCATTCCGTTGAGCCCTCACAGGAAAATTCCTGCCGAAGGCCTGGAGCAATATCTGGAAAATAT
TGAAAAAGAAGTTCTGCTCACTGCACTGAACCAGACACACTGGAACCGGACTTTGGCTGCTAAAAAACTTGGAATGAGTT
TTCGCTCTTTACGTTATCGACTTAAAAAATTTGGGCTGGATACCGATGATGAGTAG

Domains

Predicted by InterproScan.

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

• Bacterial regulatory protein, Fis family (HTH_8) (424-464)

• Response regulator receiver domain (Response_reg) (8-117)

3D structure

• AlphaFold DB: A0A062BUE5

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	74.788	100	0.749
pilR	Pseudomonas aeruginosa PAK	48.188	99.575	0.48