Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   D6022_RS03235 Genome accession   NZ_CP032538
Coordinates   647105..647899 (-) Length   264 a.a.
NCBI ID   WP_003177960.1    Uniprot ID   A0ABY3FW26
Organism   Bacillus licheniformis strain MT-B06     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 642105..652899
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D6022_RS03205 - 642123..642281 (-) 159 WP_003177948.1 CxxH/CxxC protein -
  D6022_RS03210 - 642480..642962 (-) 483 WP_009330015.1 DUF4234 domain-containing protein -
  D6022_RS03215 - 643393..643911 (-) 519 WP_011201784.1 N-acetyltransferase -
  D6022_RS03220 - 643942..644412 (-) 471 WP_009330017.1 membrane protein -
  D6022_RS03225 - 644669..645514 (-) 846 WP_011198491.1 S-adenosyl-l-methionine hydroxide adenosyltransferase family protein -
  D6022_RS03230 htrA 645811..647022 (-) 1212 WP_017475028.1 S1C family serine protease Regulator
  D6022_RS03235 vicX 647105..647899 (-) 795 WP_003177960.1 MBL fold metallo-hydrolase Regulator
  D6022_RS03240 - 647914..648762 (-) 849 WP_003177962.1 two-component system regulatory protein YycI -
  D6022_RS03245 - 648749..650113 (-) 1365 WP_003177963.1 YycH family regulatory protein -
  D6022_RS03250 walK 650103..651947 (-) 1845 WP_003177965.1 cell wall metabolism sensor histidine kinase WalK -
  D6022_RS03255 walR 651955..652662 (-) 708 WP_003177967.1 cell wall metabolism DNA-binding response regulator WalR -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29219.18 Da        Isoelectric Point: 5.7678

>NTDB_id=276573 D6022_RS03235 WP_003177960.1 647105..647899(-) (vicX) [Bacillus licheniformis strain MT-B06]
MSLQFSVLASGSTGNALYLETDDHAFLVDAGLSGKAMEGLMAQIDRKLDQLDGIFVTHEHSDHIKGLGVLARKYELPVYA
NEKTWKAMEGHIGKMDNGQKFVFPMETVKSFGSLDVESFGVSHDAAEPMFYVFHYNGRKLALITDTGYVSDRMKGIIRSA
NAFVFESNHDVGMLQMGRYPWNIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLAAK
GFAAGETFDLYDTDPKKPTPLVAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=276573 D6022_RS03235 WP_003177960.1 647105..647899(-) (vicX) [Bacillus licheniformis strain MT-B06]
ATGAGCCTGCAATTTAGCGTACTTGCGAGCGGGAGTACCGGTAATGCTTTATATTTGGAAACCGATGACCACGCTTTTTT
AGTTGACGCAGGACTTAGCGGGAAGGCGATGGAAGGGCTGATGGCGCAAATTGATCGAAAGCTTGATCAGCTCGACGGCA
TCTTTGTTACACATGAGCACAGTGACCATATAAAAGGGCTTGGCGTGCTGGCAAGAAAATATGAGCTGCCCGTTTACGCC
AATGAAAAAACGTGGAAGGCGATGGAAGGGCATATCGGCAAAATGGATAACGGCCAAAAGTTCGTTTTTCCAATGGAAAC
CGTCAAGTCATTCGGCTCCCTTGATGTCGAATCGTTCGGGGTATCCCATGATGCCGCAGAGCCGATGTTTTACGTTTTTC
ATTACAATGGCCGAAAGCTCGCTTTGATTACGGATACGGGCTATGTCAGCGACAGAATGAAAGGCATCATCCGCTCGGCA
AACGCTTTTGTTTTTGAAAGCAATCATGATGTCGGCATGCTGCAAATGGGCCGCTATCCGTGGAACATCAAGCGCCGGAT
TCTAAGCGACGTCGGACACGTATCCAATGAGGACGCGGCACTCGCAATGACCGATGTAATCGGCGATGAGACATCGAGAA
TTTATTTGGCTCATTTAAGCCAGGACAACAACATGAAAGAGCTGGCAAGAATGTCTGTGCAGCAAACGCTGGCTGCCAAA
GGATTTGCGGCAGGAGAAACGTTTGACTTATATGATACCGATCCTAAGAAACCGACGCCTCTCGTAGCGGTGTAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.053

99.242

0.527