Detailed information
Bioinformatically predicted
Overview
| Name | pilR | Type | Regulator |
| Locus tag | C6N17_RS17985 | Genome accession | NZ_CP027254 |
| Coordinates | 3575536..3576948 (+) | Length | 470 a.a. |
| NCBI ID | WP_002121217.1 | Uniprot ID | K9C4E8 |
| Organism | Acinetobacter pittii strain WCHAP100020 | ||
| Function | regulation of type IV pilus assembly (predicted from homology) Competence regulation |
||
Genomic Context
Location: 3570536..3581948
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N17_RS17965 (C6N17_18020) | thrC | 3570793..3571932 (+) | 1140 | WP_002048893.1 | threonine synthase | - |
| C6N17_RS17970 (C6N17_18025) | pbpG | 3572039..3573085 (-) | 1047 | WP_005065720.1 | D-alanyl-D-alanine endopeptidase PBP7/8 | - |
| C6N17_RS17975 (C6N17_18030) | gacA | 3573298..3573933 (+) | 636 | WP_002121174.1 | response regulator | - |
| C6N17_RS17980 (C6N17_18035) | pilS | 3573944..3575512 (+) | 1569 | WP_016802656.1 | sensor histidine kinase | Regulator |
| C6N17_RS17985 (C6N17_18040) | pilR | 3575536..3576948 (+) | 1413 | WP_002121217.1 | sigma-54-dependent transcriptional regulator | Regulator |
| C6N17_RS17990 (C6N17_18045) | ctpA | 3576952..3578136 (-) | 1185 | WP_002121269.1 | S41 family peptidase | - |
| C6N17_RS17995 (C6N17_18050) | gpmI | 3578152..3579699 (-) | 1548 | WP_002121200.1 | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | - |
| C6N17_RS18000 (C6N17_18055) | lptG | 3579826..3580896 (-) | 1071 | WP_002121203.1 | LPS export ABC transporter permease LptG | - |
Sequence
Protein
Download Length: 470 a.a. Molecular weight: 52625.61 Da Isoelectric Point: 6.3452
>NTDB_id=276104 C6N17_RS17985 WP_002121217.1 3575536..3576948(+) (pilR) [Acinetobacter pittii strain WCHAP100020]
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGLELVQHVSQTYPHTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPINQIHLDQLLKKALNQPKQEHEFGETTLENDLLIGRSPPIQNLRTAIKKIARS
QAPVFVTGESGTGKEVVANLIHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVQQGKFRQDLFFRIHVMDIMLPPLRDRGGDILL
LANHFIQKVCTEWGVSSKQLTASAETYLLQQDFPGNVRELRNMIERAITLSDDESIDLTHLAPPPRGTSVSPQIVTKQLN
QTPAVQTHPKFPMEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTEMGEEV
MAEQQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKQLFTQFHYDACLTDLNLPDGSGLELVQHVSQTYPHTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPINQIHLDQLLKKALNQPKQEHEFGETTLENDLLIGRSPPIQNLRTAIKKIARS
QAPVFVTGESGTGKEVVANLIHRLSNRSEGPFIAINCGAIPTELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLSMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLDLLVQQGKFRQDLFFRIHVMDIMLPPLRDRGGDILL
LANHFIQKVCTEWGVSSKQLTASAETYLLQQDFPGNVRELRNMIERAITLSDDESIDLTHLAPPPRGTSVSPQIVTKQLN
QTPAVQTHPKFPMEGLERYLENIEKDILLNALNMTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTEMGEEV
Nucleotide
Download Length: 1413 bp
>NTDB_id=276104 C6N17_RS17985 WP_002121217.1 3575536..3576948(+) (pilR) [Acinetobacter pittii strain WCHAP100020]
ATGGCAGAACAGCAACCACTCGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTGTTAATGCAAATGACTCTTGCACG
AATGGGGATTAAGACACATCTTGCTTATCGGGTTGAACAGGCCAAACAGCTCTTTACTCAGTTTCATTACGATGCGTGCT
TGACCGATTTAAATCTACCTGATGGTAGTGGCTTAGAATTGGTCCAACATGTTTCTCAAACTTACCCACACACACCCATT
GCAGTCTTAACCGCATACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCAGGAGCTTTTGATTTTGTCAGCAAACC
GATTAACCAAATTCACTTAGATCAATTGTTAAAAAAGGCGCTCAACCAGCCAAAACAAGAGCATGAGTTCGGTGAAACAA
CATTAGAAAATGACTTATTAATTGGGCGTTCACCACCTATACAAAACTTACGGACAGCTATTAAAAAAATAGCCCGCTCC
CAAGCTCCTGTATTTGTTACAGGCGAATCTGGTACGGGTAAAGAAGTTGTTGCTAATCTAATTCACCGCTTAAGCAACCG
CAGTGAAGGACCATTTATTGCAATTAACTGTGGAGCAATCCCAACTGAGCTCATGGAAAGTGAACTTTTCGGGCATAAAA
AAGGCAGTTTTACTGGAGCAACCCAAGACAAACAAGGTCTGATTTTATCGGCACACGGCGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTGCCTTTAAGTATGCAAGTTAAATTGCTTCGGGCAGTACAAGAGAAAAAGATTCGCCCTGTAGGTTCAGA
TCAGGAAATTGATGTTGATTTTCGAGTAATCAGTGCGAGCCACCAAGACTTAGATTTATTAGTTCAACAAGGTAAATTCC
GTCAGGACTTATTTTTCCGTATTCATGTTATGGATATTATGTTGCCGCCACTACGTGACCGTGGTGGAGATATTTTGCTA
TTGGCCAATCATTTTATTCAAAAGGTTTGTACGGAATGGGGAGTTTCAAGCAAGCAATTAACGGCGAGCGCTGAAACTTA
CTTATTGCAGCAAGACTTTCCGGGTAATGTTCGTGAATTAAGAAATATGATTGAGCGAGCTATTACTTTAAGTGATGATG
AGTCCATTGATTTAACACACTTAGCGCCTCCTCCTAGAGGCACTAGCGTGAGCCCGCAAATCGTAACGAAACAACTAAAT
CAAACACCGGCTGTTCAGACTCACCCAAAATTTCCAATGGAAGGTTTAGAACGCTACTTAGAAAATATCGAAAAAGATAT
TTTACTGAATGCTCTGAACATGACGCATTGGAATCGAACTTTAGCGGCTAAAAAGTTAGGAATGACTTTCCGTTCTTTGC
GCTATCGACTCAAAAAGTTTGGCTTAGATACTGAAATGGGAGAGGAAGTATAA
ATGGCAGAACAGCAACCACTCGTTTTGCTTGTAGACGATGAAGAAGATTTGTGCCTGTTAATGCAAATGACTCTTGCACG
AATGGGGATTAAGACACATCTTGCTTATCGGGTTGAACAGGCCAAACAGCTCTTTACTCAGTTTCATTACGATGCGTGCT
TGACCGATTTAAATCTACCTGATGGTAGTGGCTTAGAATTGGTCCAACATGTTTCTCAAACTTACCCACACACACCCATT
GCAGTCTTAACCGCATACGGCAATATGGATATTGCAATTGCAGCATTAAAAGCAGGAGCTTTTGATTTTGTCAGCAAACC
GATTAACCAAATTCACTTAGATCAATTGTTAAAAAAGGCGCTCAACCAGCCAAAACAAGAGCATGAGTTCGGTGAAACAA
CATTAGAAAATGACTTATTAATTGGGCGTTCACCACCTATACAAAACTTACGGACAGCTATTAAAAAAATAGCCCGCTCC
CAAGCTCCTGTATTTGTTACAGGCGAATCTGGTACGGGTAAAGAAGTTGTTGCTAATCTAATTCACCGCTTAAGCAACCG
CAGTGAAGGACCATTTATTGCAATTAACTGTGGAGCAATCCCAACTGAGCTCATGGAAAGTGAACTTTTCGGGCATAAAA
AAGGCAGTTTTACTGGAGCAACCCAAGACAAACAAGGTCTGATTTTATCGGCACACGGCGGCAGTTTATTTTTAGATGAA
ATTGCCGAATTGCCTTTAAGTATGCAAGTTAAATTGCTTCGGGCAGTACAAGAGAAAAAGATTCGCCCTGTAGGTTCAGA
TCAGGAAATTGATGTTGATTTTCGAGTAATCAGTGCGAGCCACCAAGACTTAGATTTATTAGTTCAACAAGGTAAATTCC
GTCAGGACTTATTTTTCCGTATTCATGTTATGGATATTATGTTGCCGCCACTACGTGACCGTGGTGGAGATATTTTGCTA
TTGGCCAATCATTTTATTCAAAAGGTTTGTACGGAATGGGGAGTTTCAAGCAAGCAATTAACGGCGAGCGCTGAAACTTA
CTTATTGCAGCAAGACTTTCCGGGTAATGTTCGTGAATTAAGAAATATGATTGAGCGAGCTATTACTTTAAGTGATGATG
AGTCCATTGATTTAACACACTTAGCGCCTCCTCCTAGAGGCACTAGCGTGAGCCCGCAAATCGTAACGAAACAACTAAAT
CAAACACCGGCTGTTCAGACTCACCCAAAATTTCCAATGGAAGGTTTAGAACGCTACTTAGAAAATATCGAAAAAGATAT
TTTACTGAATGCTCTGAACATGACGCATTGGAATCGAACTTTAGCGGCTAAAAAGTTAGGAATGACTTTCCGTTCTTTGC
GCTATCGACTCAAAAAGTTTGGCTTAGATACTGAAATGGGAGAGGAAGTATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilR | Acinetobacter baumannii strain A118 |
85.835 |
100 |
0.864 |
| pilR | Pseudomonas aeruginosa PAK |
50.763 |
97.66 |
0.496 |