Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | C6N17_RS10540 | Genome accession | NZ_CP027254 |
| Coordinates | 2074591..2074971 (-) | Length | 126 a.a. |
| NCBI ID | WP_002121425.1 | Uniprot ID | A0A009HD22 |
| Organism | Acinetobacter pittii strain WCHAP100020 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 2069591..2079971
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N17_RS10510 (C6N17_10550) | tadA | 2069595..2070098 (-) | 504 | WP_002121378.1 | tRNA adenosine(34) deaminase TadA | - |
| C6N17_RS10515 (C6N17_10555) | hibch | 2070104..2071228 (-) | 1125 | WP_016803061.1 | enoyl-CoA hydratase/isomerase family protein | - |
| C6N17_RS10520 (C6N17_10560) | ung | 2071225..2071938 (-) | 714 | WP_002121342.1 | uracil-DNA glycosylase | - |
| C6N17_RS10525 (C6N17_10565) | - | 2071992..2072588 (-) | 597 | WP_002121363.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| C6N17_RS10530 (C6N17_10570) | gspK | 2072816..2073775 (-) | 960 | WP_002121457.1 | type II secretion system minor pseudopilin GspK | - |
| C6N17_RS10535 (C6N17_10575) | xcpW | 2073776..2074591 (-) | 816 | WP_002121460.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| C6N17_RS10540 (C6N17_10580) | xcpV | 2074591..2074971 (-) | 381 | WP_002121425.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| C6N17_RS10545 (C6N17_10585) | - | 2074961..2075515 (-) | 555 | WP_002121405.1 | type II secretion system protein | - |
| C6N17_RS10550 (C6N17_10590) | - | 2075522..2076130 (-) | 609 | WP_002121414.1 | TetR/AcrR family transcriptional regulator | - |
| C6N17_RS10555 (C6N17_10595) | ycfH | 2076167..2076940 (-) | 774 | WP_002121462.1 | TatD family hydrolase | - |
| C6N17_RS10560 (C6N17_10600) | pilZ | 2076958..2077299 (-) | 342 | WP_002121335.1 | PilZ domain-containing protein | - |
| C6N17_RS10565 (C6N17_10605) | holB | 2077310..2078290 (-) | 981 | WP_002121362.1 | DNA polymerase III subunit delta' | - |
| C6N17_RS10570 (C6N17_10610) | kdsB | 2078304..2079065 (-) | 762 | WP_002121419.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13976.17 Da Isoelectric Point: 9.4463
>NTDB_id=276085 C6N17_RS10540 WP_002121425.1 2074591..2074971(-) (xcpV) [Acinetobacter pittii strain WCHAP100020]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEIALMEINQEWLEGTQSKQVTSQGETWQI
DKSAQSTISPNVQKVDLQISLYDSDKGKVQNGITHLVFFNYPMKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=276085 C6N17_RS10540 WP_002121425.1 2074591..2074971(-) (xcpV) [Acinetobacter pittii strain WCHAP100020]
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACTCTATTAGAAGTAATGGTTGCTTTAGCAATTTTTGCAGTGGCGGCTGTCGCGTTAACTAA
AGTAGCCATGCAATATACTCAATCTACCTCAAATGCAATTCTTAGAACAAAAGCTCAGTTTGTAGCAATGAATGAAATTG
CTTTAATGGAGATAAATCAGGAATGGCTTGAAGGTACTCAAAGTAAGCAAGTTACTTCTCAAGGCGAAACATGGCAGATT
GACAAATCTGCACAATCTACAATTAGCCCGAATGTTCAGAAAGTAGATTTACAAATTAGCTTATATGATTCAGATAAGGG
CAAAGTTCAAAATGGTATTACTCACTTGGTATTTTTTAATTATCCAATGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
93.651 |
100 |
0.937 |