Detailed information NTG0276084

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: C6N17_RS10535
• Genome accession: NZ_CP027254
• Coordinates: 2073776..2074591 (-)
• Length: 271 a.a.
• NCBI ID: WP_002121460.1
• Uniprot ID: A0A009NS11
• Organism: Acinetobacter pittii strain WCHAP100020
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2068776..2079591

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C6N17_RS10505 (C6N17_10545)	-	2069084..2069524 (-)	441	WP_002121449.1	SRPBCC family protein	-
C6N17_RS10510 (C6N17_10550)	tadA	2069595..2070098 (-)	504	WP_002121378.1	tRNA adenosine(34) deaminase TadA	-
C6N17_RS10515 (C6N17_10555)	hibch	2070104..2071228 (-)	1125	WP_016803061.1	enoyl-CoA hydratase/isomerase family protein	-
C6N17_RS10520 (C6N17_10560)	ung	2071225..2071938 (-)	714	WP_002121342.1	uracil-DNA glycosylase	-
C6N17_RS10525 (C6N17_10565)	-	2071992..2072588 (-)	597	WP_002121363.1	6-pyruvoyl trahydropterin synthase family protein	-
C6N17_RS10530 (C6N17_10570)	gspK	2072816..2073775 (-)	960	WP_002121457.1	type II secretion system minor pseudopilin GspK	-
C6N17_RS10535 (C6N17_10575)	xcpW	2073776..2074591 (-)	816	WP_002121460.1	type II secretion system minor pseudopilin GspJ	Machinery gene
C6N17_RS10540 (C6N17_10580)	xcpV	2074591..2074971 (-)	381	WP_002121425.1	type II secretion system minor pseudopilin GspI	Machinery gene
C6N17_RS10545 (C6N17_10585)	-	2074961..2075515 (-)	555	WP_002121405.1	type II secretion system protein	-
C6N17_RS10550 (C6N17_10590)	-	2075522..2076130 (-)	609	WP_002121414.1	TetR/AcrR family transcriptional regulator	-
C6N17_RS10555 (C6N17_10595)	ycfH	2076167..2076940 (-)	774	WP_002121462.1	TatD family hydrolase	-
C6N17_RS10560 (C6N17_10600)	pilZ	2076958..2077299 (-)	342	WP_002121335.1	PilZ domain-containing protein	-
C6N17_RS10565 (C6N17_10605)	holB	2077310..2078290 (-)	981	WP_002121362.1	DNA polymerase III subunit delta'	-
C6N17_RS10570 (C6N17_10610)	kdsB	2078304..2079065 (-)	762	WP_002121419.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 271 a.a.
• Molecular weight: 30932.32 Da
• Isoelectric Point: 9.9694

>NTDB_id=276084 C6N17_RS10535 WP_002121460.1 2073776..2074591(-) (xcpW) [Acinetobacter pittii strain WCHAP100020]
MIKNKSFRSPSSASRLAVRSEQMMRGYSEQSSSSCTQTKHCFKDSHTRNIVSHLATRSSSARLTRASGFTLVELLVSIAI
FAILSLLGWKVFDYLLKVRDRNTQHEVQLFELQDAYQQVLRDTLQIIPLSANQGGQLRPALEIDNQVLRFSKAGVTDPLK
QGLSPFERIEYRYDPDQKKLYRLKYSNLNTSNREQPLSSTLLSQVEQFQIMVLTPQEVTKWPEVNIDPTKPDEFRKLPKG
IKMQLTVAGVNYEWIYSLNQGDLSLSKQGGQ

Nucleotide

• Length: 816 bp

>NTDB_id=276084 C6N17_RS10535 WP_002121460.1 2073776..2074591(-) (xcpW) [Acinetobacter pittii strain WCHAP100020]
ATGATAAAGAATAAAAGTTTTCGCTCTCCAAGCTCAGCTTCACGTCTTGCGGTACGATCGGAGCAGATGATGAGGGGTTA
CTCCGAGCAAAGCTCTTCGTCTTGCACTCAGACAAAGCATTGCTTTAAAGACTCTCACACTCGAAACATAGTTTCTCATC
TTGCGACACGATCGAGCAGTGCTCGATTAACTCGTGCCTCAGGATTTACTTTAGTTGAGCTTTTAGTTTCAATTGCAATT
TTTGCTATTTTATCTTTGTTGGGTTGGAAGGTTTTTGACTATTTATTAAAAGTTCGCGATCGTAATACTCAACATGAAGT
GCAGCTATTTGAATTACAAGATGCTTATCAACAAGTTTTGCGTGATACATTGCAAATTATACCTTTATCAGCCAATCAAG
GCGGGCAATTACGTCCAGCTTTAGAGATTGATAATCAAGTTCTCCGCTTTAGTAAGGCGGGTGTTACTGATCCATTAAAG
CAAGGATTATCACCTTTTGAGCGTATCGAATATCGATATGATCCTGATCAAAAAAAGCTTTATCGCCTTAAATATAGTAA
CTTAAATACTTCAAATAGAGAGCAACCCTTATCAAGTACGCTGTTGAGCCAAGTTGAACAATTTCAAATTATGGTTTTGA
CACCTCAAGAAGTAACAAAGTGGCCTGAAGTTAATATTGACCCTACAAAACCTGATGAATTTAGGAAGTTGCCAAAAGGA
ATAAAAATGCAACTCACGGTTGCAGGTGTAAATTATGAGTGGATTTATAGCTTAAACCAAGGTGACTTATCGCTCTCCAA
ACAGGGAGGTCAATAA

Domains

Predicted by InterproScan.

• Type II secretion system (T2SS), protein J (T2SSJ) (121-250)

• Prokaryotic N-terminal methylation motif (N_methyl) (65-87)

3D structure

• AlphaFold DB: A0A009NS11

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	88.889	83.026	0.738