Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | C6N18_RS09010 | Genome accession | NZ_CP027246 |
| Coordinates | 1695430..1695810 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836914.1 | Uniprot ID | A0A098SJS3 |
| Organism | Acinetobacter baumannii strain WCHAB005078 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1690430..1700810
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C6N18_RS08980 (C6N18_08975) | kdsB | 1691333..1692094 (+) | 762 | WP_000680692.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| C6N18_RS08985 (C6N18_08980) | - | 1692106..1693086 (+) | 981 | WP_001075416.1 | DNA polymerase III subunit delta' | - |
| C6N18_RS08990 (C6N18_08985) | - | 1693098..1693439 (+) | 342 | WP_001183027.1 | PilZ domain-containing protein | - |
| C6N18_RS08995 (C6N18_08990) | - | 1693457..1694230 (+) | 774 | WP_000497300.1 | TatD family hydrolase | - |
| C6N18_RS09000 (C6N18_08995) | - | 1694268..1694876 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| C6N18_RS09005 (C6N18_09000) | - | 1694886..1695440 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| C6N18_RS09010 (C6N18_09005) | xcpV | 1695430..1695810 (+) | 381 | WP_000836914.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| C6N18_RS09015 (C6N18_09010) | xcpW | 1695810..1696511 (+) | 702 | WP_000594579.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| C6N18_RS09020 (C6N18_09015) | gspK | 1696511..1697470 (+) | 960 | WP_000301478.1 | type II secretion system minor pseudopilin GspK | - |
| C6N18_RS09025 (C6N18_09020) | - | 1697700..1698296 (+) | 597 | WP_000908449.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| C6N18_RS09030 (C6N18_09025) | ung | 1698347..1699060 (+) | 714 | WP_001177527.1 | uracil-DNA glycosylase | - |
| C6N18_RS09035 (C6N18_09030) | - | 1699057..1700181 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| C6N18_RS09040 (C6N18_09035) | tadA | 1700188..1700691 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 14074.34 Da Isoelectric Point: 10.0341
>NTDB_id=275988 C6N18_RS09010 WP_000836914.1 1695430..1695810(+) (xcpV) [Acinetobacter baumannii strain WCHAB005078]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKRKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=275988 C6N18_RS09010 WP_000836914.1 1695430..1695810(+) (xcpV) [Acinetobacter baumannii strain WCHAB005078]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCTGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACTCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAGTTTGTGGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACTCAAAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATC
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGAG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
99.206 |
100 |
0.992 |