Detailed information    

insolico Bioinformatically predicted

Overview


Name   eeP   Type   Regulator
Locus tag   C5Z25_RS01355 Genome accession   NZ_CP027190
Coordinates   286402..287679 (-) Length   425 a.a.
NCBI ID   WP_105450982.1    Uniprot ID   A0A2R3JLM1
Organism   Lactobacillus sp. CBA3605     
Function   processing of ComS (predicted from homology)   
Competence regulation

Genomic Context


Location: 281402..292679
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5Z25_RS01350 (C5Z25_01350) - 284652..286361 (-) 1710 WP_105450980.1 proline--tRNA ligase -
  C5Z25_RS01355 (C5Z25_01355) eeP 286402..287679 (-) 1278 WP_105450982.1 RIP metalloprotease RseP Regulator
  C5Z25_RS01360 (C5Z25_01360) - 287723..288508 (-) 786 WP_105450984.1 phosphatidate cytidylyltransferase -
  C5Z25_RS01365 (C5Z25_01365) - 288525..289304 (-) 780 WP_105450985.1 isoprenyl transferase -
  C5Z25_RS01370 (C5Z25_01370) frr 289424..289987 (-) 564 WP_105450987.1 ribosome recycling factor -
  C5Z25_RS01375 (C5Z25_01375) pyrH 289989..290711 (-) 723 WP_105448550.1 UMP kinase -
  C5Z25_RS01380 (C5Z25_01380) tsf 290868..291746 (-) 879 WP_105448551.1 translation elongation factor Ts -
  C5Z25_RS01385 (C5Z25_01385) rpsB 291848..292651 (-) 804 WP_105450989.1 30S ribosomal protein S2 -

Sequence


Protein


Download         Length: 425 a.a.        Molecular weight: 46073.93 Da        Isoelectric Point: 10.1372

>NTDB_id=275640 C5Z25_RS01355 WP_105450982.1 286402..287679(-) (eeP) [Lactobacillus sp. CBA3605]
MIVTIITFIIVFGILVIVHEFGHFFFAKRAGILVREFSVGMGPKIVAMRRHATTYTLRLLPIGGYVRMAGVADDEDEELK
PGTPVSLQIGADGLVHSINASKKTTLFNGIPMSVTATDLEKELWIEGYENGDETAVKRYQVQHDATIVEHDGTEVQIAPV
DVQFQSAKLWQRMLTNFAGPMNNFILAIITFAILAFMQGGVTTVTTHVAGTTANSVARQAGIKKNDQIVAVNGKKMTDAQ
SISLLIQDNPNKRLQLTLKRAGKAQTIAVKPAAKKVAGNRVGQIGVKWATVTDTSLSAKLGYGVTGAWNITKQIFQVLGH
MVTHGFSLNDLGGPVAIFATTSQAAKSGVRQVIYLLAVLSINLGIVNLLPIPALDGGKILLNIVEGIRGKPLRLETESVI
TLIGFGLLMLLMVLVTWNDIQRYFF

Nucleotide


Download         Length: 1278 bp        

>NTDB_id=275640 C5Z25_RS01355 WP_105450982.1 286402..287679(-) (eeP) [Lactobacillus sp. CBA3605]
TTGATAGTTACGATTATTACGTTCATTATCGTTTTTGGGATTCTCGTTATTGTCCATGAGTTTGGACATTTCTTTTTTGC
CAAACGAGCCGGAATTTTAGTGCGCGAATTCTCAGTCGGTATGGGGCCTAAGATTGTGGCCATGCGACGGCATGCAACTA
CCTATACGTTACGCTTATTACCCATTGGTGGTTATGTACGGATGGCTGGTGTTGCCGATGATGAGGATGAAGAACTGAAG
CCTGGTACGCCGGTTAGTTTACAAATTGGCGCTGATGGGTTAGTTCATTCCATTAATGCTAGTAAGAAAACAACTTTATT
TAATGGAATTCCCATGTCGGTTACGGCGACAGACTTAGAAAAAGAACTTTGGATTGAAGGCTATGAAAATGGCGATGAAA
CTGCGGTTAAACGTTATCAAGTGCAACATGATGCGACTATTGTCGAACATGACGGGACTGAAGTTCAGATTGCACCGGTA
GATGTCCAGTTTCAATCAGCTAAGTTATGGCAGCGAATGCTCACTAATTTTGCTGGTCCGATGAATAATTTCATTTTAGC
CATCATCACGTTTGCTATCTTAGCGTTCATGCAAGGTGGCGTAACGACGGTGACCACGCATGTTGCCGGAACGACGGCTA
ATTCGGTCGCCCGCCAAGCAGGTATTAAGAAGAATGATCAGATTGTCGCCGTTAATGGCAAAAAAATGACGGATGCCCAG
TCAATCTCATTACTTATTCAAGATAATCCCAATAAACGGTTGCAACTAACCCTTAAACGGGCGGGGAAAGCGCAAACAAT
CGCTGTCAAGCCAGCGGCTAAGAAAGTTGCGGGTAATCGAGTTGGTCAAATTGGGGTTAAATGGGCGACGGTCACGGATA
CGAGTTTAAGCGCAAAATTAGGCTATGGCGTGACTGGTGCATGGAATATTACCAAGCAAATCTTCCAAGTATTAGGCCAT
ATGGTAACCCATGGGTTTAGTTTAAATGACCTCGGTGGGCCAGTTGCAATTTTTGCAACGACCTCACAGGCGGCCAAATC
CGGGGTGCGGCAGGTGATTTATTTATTAGCAGTCTTGTCGATTAACTTAGGAATTGTTAATTTATTACCCATTCCGGCCC
TGGATGGTGGTAAAATTTTATTAAACATCGTTGAAGGTATTCGCGGTAAACCACTACGACTTGAAACTGAAAGTGTGATT
ACATTAATTGGTTTTGGCTTGTTAATGTTATTAATGGTTTTAGTGACTTGGAATGATATTCAGCGTTATTTTTTCTAA

Domains


Predicted by InterproScan.

(7-411)

(212-260)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A2R3JLM1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  eeP Streptococcus thermophilus LMG 18311

50.467

100

0.508

  eeP Streptococcus thermophilus LMD-9

49.766

100

0.501


Multiple sequence alignment