Detailed information NTG0275596

Bioinformatically predicted

Overview

• Name: pilY2
• Type: Machinery gene
• Locus tag: CSB68_RS19405
• Genome accession: NZ_CP027183
• Coordinates: 3973035..3973517 (+)
• Length: 160 a.a.
• NCBI ID: WP_001046417.1
• Uniprot ID: -
• Organism: Acinetobacter baumannii strain AR_0052
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3968035..3978517

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CSB68_RS19395 (CSB68_3892)	pilX	3968338..3969156 (+)	819	WP_000149374.1	PilX N-terminal domain-containing pilus assembly protein	Machinery gene
CSB68_RS19400 (CSB68_3893)	pilY1	3969168..3973022 (+)	3855	WP_000768966.1	PilC/PilY family type IV pilus protein	Machinery gene
CSB68_RS19405 (CSB68_3894)	pilY2	3973035..3973517 (+)	483	WP_001046417.1	type IV pilin protein	Machinery gene
CSB68_RS19410 (CSB68_3895)	pilE	3973514..3973939 (+)	426	WP_000788342.1	type IV pilin protein	Machinery gene
CSB68_RS19415 (CSB68_3896)	rpsP	3974086..3974337 (+)	252	WP_000260334.1	30S ribosomal protein S16	-
CSB68_RS19420 (CSB68_3897)	rimM	3974357..3974905 (+)	549	WP_000189236.1	ribosome maturation factor RimM	-
CSB68_RS19425 (CSB68_3898)	trmD	3974951..3975691 (+)	741	WP_000464599.1	tRNA (guanosine(37)-N1)-methyltransferase TrmD	-
CSB68_RS19430 (CSB68_3899)	rplS	3975899..3976267 (+)	369	WP_000014562.1	50S ribosomal protein L19	-
CSB68_RS19435 (CSB68_3900)	-	3976319..3977260 (-)	942	WP_085946156.1	lipase family alpha/beta hydrolase	-
CSB68_RS19440 (CSB68_3901)	-	3977375..3978409 (-)	1035	WP_001189451.1	lipase secretion chaperone	-

Sequence

Protein

• Length: 160 a.a.
• Molecular weight: 17516.77 Da
• Isoelectric Point: 8.4817

>NTDB_id=275596 CSB68_RS19405 WP_001046417.1 3973035..3973517(+) (pilY2) [Acinetobacter baumannii strain AR_0052]
MNKYSILRFNQGVTLIELMVVIVIVAIFASIAIPSYQSYSRRATASAAKSEILKLAEQLEQHKSRNFTYRGFTTTSITLP
RGGYTIQITDDTTTGNLLTNAAANGQTWVIKATTTDSRNFNFIAKNSGLRCQSLTATAVDNDCGGTVTCNVCETNSENWQ

Nucleotide

• Length: 483 bp

>NTDB_id=275596 CSB68_RS19405 WP_001046417.1 3973035..3973517(+) (pilY2) [Acinetobacter baumannii strain AR_0052]
ATGAATAAGTACTCTATTCTACGGTTCAATCAAGGGGTTACCTTGATTGAGCTTATGGTCGTGATTGTTATCGTTGCTAT
TTTTGCTTCAATTGCTATCCCTTCATATCAAAGTTATAGCCGTAGAGCTACTGCATCTGCGGCTAAAAGTGAAATTTTGA
AATTAGCTGAACAATTGGAACAGCATAAATCAAGAAATTTTACTTATAGGGGGTTTACCACAACCTCTATAACCCTACCT
CGCGGGGGATATACGATTCAGATTACTGATGATACGACGACAGGAAATTTATTGACGAATGCTGCTGCAAATGGACAAAC
ATGGGTCATTAAAGCGACAACTACAGATTCAAGAAACTTTAATTTTATTGCTAAGAATTCAGGTTTGCGTTGTCAAAGTT
TAACAGCTACGGCTGTTGATAATGACTGTGGTGGAACAGTCACTTGCAATGTATGTGAAACAAATAGTGAGAATTGGCAA
TGA

Domains

Predicted by InterproScan.

• Type IV minor pilin ComP, DNA uptake sequence receptor (ComP_DUS) (34-115)

• Prokaryotic N-terminal methylation motif (N_methyl) (10-32)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilY2	Acinetobacter baumannii D1279779	98.125	100	0.981
comE	Acinetobacter baylyi ADP1	41.279	100	0.444