Detailed information
Bioinformatically predicted
Overview
| Name | pilE | Type | Machinery gene |
| Locus tag | CSB68_RS19410 | Genome accession | NZ_CP027183 |
| Coordinates | 3973514..3973939 (+) | Length | 141 a.a. |
| NCBI ID | WP_000788342.1 | Uniprot ID | N9K1U0 |
| Organism | Acinetobacter baumannii strain AR_0052 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3968514..3978939
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSB68_RS19400 (CSB68_3893) | pilY1 | 3969168..3973022 (+) | 3855 | WP_000768966.1 | PilC/PilY family type IV pilus protein | Machinery gene |
| CSB68_RS19405 (CSB68_3894) | pilY2 | 3973035..3973517 (+) | 483 | WP_001046417.1 | type IV pilin protein | Machinery gene |
| CSB68_RS19410 (CSB68_3895) | pilE | 3973514..3973939 (+) | 426 | WP_000788342.1 | type IV pilin protein | Machinery gene |
| CSB68_RS19415 (CSB68_3896) | rpsP | 3974086..3974337 (+) | 252 | WP_000260334.1 | 30S ribosomal protein S16 | - |
| CSB68_RS19420 (CSB68_3897) | rimM | 3974357..3974905 (+) | 549 | WP_000189236.1 | ribosome maturation factor RimM | - |
| CSB68_RS19425 (CSB68_3898) | trmD | 3974951..3975691 (+) | 741 | WP_000464599.1 | tRNA (guanosine(37)-N1)-methyltransferase TrmD | - |
| CSB68_RS19430 (CSB68_3899) | rplS | 3975899..3976267 (+) | 369 | WP_000014562.1 | 50S ribosomal protein L19 | - |
| CSB68_RS19435 (CSB68_3900) | - | 3976319..3977260 (-) | 942 | WP_085946156.1 | lipase family alpha/beta hydrolase | - |
| CSB68_RS19440 (CSB68_3901) | - | 3977375..3978409 (-) | 1035 | WP_001189451.1 | lipase secretion chaperone | - |
Sequence
Protein
Download Length: 141 a.a. Molecular weight: 15214.45 Da Isoelectric Point: 7.8464
>NTDB_id=275597 CSB68_RS19410 WP_000788342.1 3973514..3973939(+) (pilE) [Acinetobacter baumannii strain AR_0052]
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
MKNGFTLIEIMIVVAIIAILAAIATPSYLQYLRKGHRTAVQSEMMNIAQTLESEKVVHNRYPSNATIQSIYGSNVSPIQG
QALYKLAFATLNDSTWVLTATPISTSSQAGDGIICLNDQGQKFWAKGATVCALSASSSWTE
Nucleotide
Download Length: 426 bp
>NTDB_id=275597 CSB68_RS19410 WP_000788342.1 3973514..3973939(+) (pilE) [Acinetobacter baumannii strain AR_0052]
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
ATGAAGAATGGTTTTACTTTAATAGAAATCATGATTGTAGTAGCGATAATTGCAATTTTAGCAGCTATAGCGACACCTTC
ATATTTGCAATATTTACGTAAAGGGCATCGTACAGCTGTTCAATCCGAAATGATGAATATTGCCCAAACATTAGAATCAG
AAAAAGTAGTTCACAATCGTTATCCGTCGAATGCGACCATACAGTCGATTTATGGTTCTAATGTGAGTCCTATACAAGGT
CAGGCTCTATATAAGTTAGCTTTTGCAACTCTGAATGATTCAACTTGGGTACTTACTGCAACACCTATTTCTACTAGCTC
ACAAGCAGGTGATGGAATTATTTGTTTAAATGACCAAGGGCAAAAATTTTGGGCAAAAGGTGCCACAGTTTGTGCACTAT
CTGCTTCATCAAGTTGGACAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilE | Acinetobacter baumannii D1279779 |
92.199 |
100 |
0.922 |
| comF | Acinetobacter baylyi ADP1 |
52.143 |
99.291 |
0.518 |