Detailed information    

insolico Bioinformatically predicted

Overview

Name   letA   Type   Regulator
Locus tag   D3Z87_RS20230 Genome accession   NZ_CP032310
Coordinates   3809175..3809549 (-) Length   124 a.a.
NCBI ID   WP_003227621.1    Uniprot ID   A0A9W5LLN9
Organism   Bacillus subtilis strain WB800N     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 3804175..3814549
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D3Z87_RS20205 - 3804339..3804500 (-) 162 WP_003227632.1 hypothetical protein -
  D3Z87_RS20210 (D3Z87_20035) glpX 3804715..3805680 (-) 966 WP_003242962.1 class II fructose-bisphosphatase -
  D3Z87_RS20215 (D3Z87_20040) murAB 3805711..3807000 (-) 1290 WP_003227628.1 UDP-N-acetylglucosamine 1-carboxyvinyltransferase -
  D3Z87_RS20220 (D3Z87_20045) fsa 3807379..3808017 (-) 639 WP_003227626.1 fructose-6-phosphate aldolase -
  D3Z87_RS20225 (D3Z87_20050) fbaA 3808137..3808994 (-) 858 WP_003243339.1 class II fructose-bisphosphate aldolase -
  D3Z87_RS20230 (D3Z87_20055) letA 3809175..3809549 (-) 375 WP_003227621.1 sporulation initiation phosphotransferase Spo0F Regulator
  D3Z87_RS20235 (D3Z87_20060) ywjG 3809715..3810236 (+) 522 WP_003242809.1 DUF2529 domain-containing protein -
  D3Z87_RS20240 (D3Z87_20065) pyrG 3810318..3811925 (-) 1608 WP_003227612.1 glutamine hydrolyzing CTP synthase -
  D3Z87_RS20245 (D3Z87_20070) rpoE 3812167..3812688 (-) 522 WP_003243661.1 DNA-directed RNA polymerase subunit delta -
  D3Z87_RS20250 (D3Z87_20075) acdA 3812871..3814010 (-) 1140 WP_003242719.1 acyl-CoA dehydrogenase AcdA -

Sequence

Protein


Download         Length: 124 a.a.        Molecular weight: 14227.68 Da        Isoelectric Point: 4.6400

>NTDB_id=275575 D3Z87_RS20230 WP_003227621.1 3809175..3809549(-) (letA) [Bacillus subtilis strain WB800N]
MMNEKILIVDDQYGIRILLNEVFNKEGYQTFQAANGLQALDIVTKERPDLVLLDMKIPGMDGIEILKRMKVIDENIRVII
MTAYGELDMIQESKELGALTHFAKPFDIDEIRDAVKKYLPLKSN

Nucleotide


Download         Length: 375 bp        

>NTDB_id=275575 D3Z87_RS20230 WP_003227621.1 3809175..3809549(-) (letA) [Bacillus subtilis strain WB800N]
ATGATGAATGAAAAAATTTTAATCGTTGATGATCAATACGGCATTCGTATTTTGCTAAATGAAGTGTTCAATAAAGAAGG
CTACCAGACGTTTCAGGCTGCGAACGGCCTGCAGGCGCTTGACATTGTGACAAAAGAACGGCCCGACCTTGTGCTGTTGG
ACATGAAAATTCCCGGCATGGACGGAATCGAAATCTTAAAACGGATGAAGGTCATTGACGAAAACATCCGGGTCATTATC
ATGACGGCATACGGAGAGCTCGACATGATCCAGGAATCGAAGGAATTGGGCGCTCTGACGCACTTTGCCAAGCCGTTTGA
CATCGACGAAATCAGAGACGCCGTCAAAAAATATCTGCCCCTGAAGTCTAACTGA

Domains

Predicted by InterProScan.

Response regulator receiver domain (Response_reg)

(6-116)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A9W5LLN9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

38.462

94.355

0.363
  letA Legionella pneumophila strain ERS1305867

38.462

94.355

0.363

Multiple sequence alignment