Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | CSB70_RS07630 | Genome accession | NZ_CP027178 |
| Coordinates | 1551265..1551645 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain AR_0070 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1546265..1556645
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSB70_RS07600 (CSB70_1512) | kdsB | 1547168..1547929 (+) | 762 | WP_000680702.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| CSB70_RS07605 (CSB70_1513) | - | 1547941..1548921 (+) | 981 | WP_001075408.1 | DNA polymerase III subunit delta' | - |
| CSB70_RS07610 (CSB70_1514) | - | 1548933..1549274 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| CSB70_RS07615 (CSB70_1515) | - | 1549292..1550065 (+) | 774 | WP_000497304.1 | TatD family hydrolase | - |
| CSB70_RS07620 (CSB70_1516) | - | 1550103..1550711 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| CSB70_RS07625 (CSB70_1517) | - | 1550721..1551275 (+) | 555 | WP_087933375.1 | type II secretion system protein | - |
| CSB70_RS07630 (CSB70_1518) | xcpV | 1551265..1551645 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| CSB70_RS07635 (CSB70_1519) | xcpW | 1551645..1552346 (+) | 702 | WP_000594572.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| CSB70_RS07640 (CSB70_1520) | gspK | 1552346..1553305 (+) | 960 | WP_000301460.1 | type II secretion system minor pseudopilin GspK | - |
| CSB70_RS07645 (CSB70_1521) | - | 1553536..1554132 (+) | 597 | WP_000908455.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| CSB70_RS07650 (CSB70_1522) | ung | 1554183..1554896 (+) | 714 | WP_001177530.1 | uracil-DNA glycosylase | - |
| CSB70_RS07655 (CSB70_1523) | - | 1554893..1556017 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| CSB70_RS07660 (CSB70_1524) | tadA | 1556024..1556527 (+) | 504 | WP_001997771.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=275521 CSB70_RS07630 WP_000836911.1 1551265..1551645(+) (xcpV) [Acinetobacter baumannii strain AR_0070]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=275521 CSB70_RS07630 WP_000836911.1 1551265..1551645(+) (xcpV) [Acinetobacter baumannii strain AR_0070]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAAGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAAGG
AAAAGTACAAAATGGCATTACACATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |