Detailed information NTG0275522

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: CSB70_RS07635
• Genome accession: NZ_CP027178
• Coordinates: 1551645..1552346 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594572.1
• Uniprot ID: A0A009IN88
• Organism: Acinetobacter baumannii strain AR_0070
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1546645..1557346

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
CSB70_RS07600 (CSB70_1512)	kdsB	1547168..1547929 (+)	762	WP_000680702.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
CSB70_RS07605 (CSB70_1513)	-	1547941..1548921 (+)	981	WP_001075408.1	DNA polymerase III subunit delta'	-
CSB70_RS07610 (CSB70_1514)	-	1548933..1549274 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
CSB70_RS07615 (CSB70_1515)	-	1549292..1550065 (+)	774	WP_000497304.1	TatD family hydrolase	-
CSB70_RS07620 (CSB70_1516)	-	1550103..1550711 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
CSB70_RS07625 (CSB70_1517)	-	1550721..1551275 (+)	555	WP_087933375.1	type II secretion system protein	-
CSB70_RS07630 (CSB70_1518)	xcpV	1551265..1551645 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
CSB70_RS07635 (CSB70_1519)	xcpW	1551645..1552346 (+)	702	WP_000594572.1	type II secretion system minor pseudopilin GspJ	Machinery gene
CSB70_RS07640 (CSB70_1520)	gspK	1552346..1553305 (+)	960	WP_000301460.1	type II secretion system minor pseudopilin GspK	-
CSB70_RS07645 (CSB70_1521)	-	1553536..1554132 (+)	597	WP_000908455.1	6-pyruvoyl trahydropterin synthase family protein	-
CSB70_RS07650 (CSB70_1522)	ung	1554183..1554896 (+)	714	WP_001177530.1	uracil-DNA glycosylase	-
CSB70_RS07655 (CSB70_1523)	-	1554893..1556017 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
CSB70_RS07660 (CSB70_1524)	tadA	1556024..1556527 (+)	504	WP_001997771.1	tRNA adenosine(34) deaminase TadA	-
CSB70_RS07665 (CSB70_1525)	-	1556597..1557040 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26613.59 Da
• Isoelectric Point: 9.5501

>NTDB_id=275522 CSB70_RS07635 WP_000594572.1 1551645..1552346(+) (xcpW) [Acinetobacter baumannii strain AR_0070]
MIKNKYIHIRSFAARLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=275522 CSB70_RS07635 WP_000594572.1 1551645..1552346(+) (xcpW) [Acinetobacter baumannii strain AR_0070]
ATGATAAAAAATAAATATATTCACATCCGAAGCTTTGCTGCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGGCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGTAAAGCTGGGGTAACAGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGATCAAAAAAAACTATATCGTCTTAAATATACAAATTTAAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAATGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCACAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

3D structure

• AlphaFold DB: A0A009IN88

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.142	100	0.991