Detailed information    

insolico Bioinformatically predicted

Overview


Name   pilG   Type   Regulator
Locus tag   CSB94_RS06030 Genome accession   NZ_CP027166
Coordinates   1219369..1219776 (-) Length   135 a.a.
NCBI ID   WP_003084583.1    Uniprot ID   A0A0H2ZL28
Organism   Pseudomonas aeruginosa strain AR_0357     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context


Location: 1214369..1224776
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  CSB94_RS06010 (CSB94_1217) pilK 1215301..1216176 (-) 876 WP_003084594.1 type 4 fimbrial methyltransferase PilK -
  CSB94_RS06015 (CSB94_1218) pilJ 1216237..1218285 (-) 2049 WP_003084592.1 chemotaxis chemoreceptor PilJ -
  CSB94_RS06020 (CSB94_1219) - 1218370..1218906 (-) 537 WP_003084590.1 chemotaxis protein CheW -
  CSB94_RS06025 (CSB94_1220) pilH 1218957..1219322 (-) 366 WP_003084587.1 twitching motility response regulator PilH -
  CSB94_RS06030 (CSB94_1221) pilG 1219369..1219776 (-) 408 WP_003084583.1 twitching motility response regulator PilG Regulator
  CSB94_RS06035 (CSB94_1222) gshB 1220031..1220984 (+) 954 WP_003100943.1 glutathione synthase -
  CSB94_RS06040 (CSB94_1223) - 1221131..1222024 (+) 894 WP_003084580.1 TonB family protein -
  CSB94_RS06045 (CSB94_1224) - 1222073..1222642 (+) 570 WP_003084577.1 YqgE/AlgH family protein -
  CSB94_RS06050 (CSB94_1225) ruvX 1222642..1223076 (+) 435 WP_003084575.1 Holliday junction resolvase RuvX -
  CSB94_RS06055 (CSB94_1226) pyrR 1223188..1223700 (+) 513 WP_003084574.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  CSB94_RS06060 (CSB94_1227) - 1223724..1224728 (+) 1005 WP_003084569.1 aspartate carbamoyltransferase catalytic subunit -

Sequence


Protein


Download         Length: 135 a.a.        Molecular weight: 14718.11 Da        Isoelectric Point: 7.1340

>NTDB_id=275331 CSB94_RS06030 WP_003084583.1 1219369..1219776(-) (pilG) [Pseudomonas aeruginosa strain AR_0357]
MEQQSDGLKVMVIDDSKTIRRTAETLLKKVGCDVITAIDGFDALAKIADTHPNIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKEELLGAIKAHVPSFTPVDAVS

Nucleotide


Download         Length: 408 bp        

>NTDB_id=275331 CSB94_RS06030 WP_003084583.1 1219369..1219776(-) (pilG) [Pseudomonas aeruginosa strain AR_0357]
ATGGAACAGCAATCCGACGGTTTGAAAGTGATGGTGATCGACGATTCGAAAACGATTCGTCGCACCGCCGAAACACTGCT
GAAAAAGGTCGGTTGCGACGTGATCACGGCAATCGACGGCTTCGATGCCCTGGCGAAGATCGCCGATACCCATCCGAACA
TCATTTTCGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACCTGCGCCCTGATCAAGAACAACAGCGCGTTCAAG
TCCACCCCGGTGATCATGCTGTCCTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTA
CCTCACCAAGCCGTTCAGCAAGGAAGAGCTGCTGGGCGCGATCAAGGCACACGTACCCAGCTTCACCCCGGTGGACGCCG
TTTCCTGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A0H2ZL28

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

74.803

94.074

0.704

  vicR Streptococcus mutans UA159

44.444

86.667

0.385


Multiple sequence alignment