Detailed information
Bioinformatically predicted
Overview
| Name | covR | Type | Regulator |
| Locus tag | SSA_RS08800 | Genome accession | NC_009009 |
| Coordinates | 1794797..1795486 (-) | Length | 229 a.a. |
| NCBI ID | WP_011837380.1 | Uniprot ID | A3CPT7 |
| Organism | Streptococcus sanguinis SK36 | ||
| Function | repress comR expression (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1789797..1800486
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SSA_RS08785 (SSA_1807) | nrdR | 1790840..1791313 (-) | 474 | WP_002894570.1 | transcriptional regulator NrdR | - |
| SSA_RS08790 (SSA_1808) | - | 1791484..1792299 (-) | 816 | WP_011837378.1 | endonuclease/exonuclease/phosphatase family protein | - |
| SSA_RS08795 (SSA_1809) | - | 1792317..1794509 (-) | 2193 | WP_011837379.1 | PTS transporter subunit IIBC | - |
| SSA_RS08800 (SSA_1810) | covR | 1794797..1795486 (-) | 690 | WP_011837380.1 | response regulator transcription factor | Regulator |
| SSA_RS08805 (SSA_1811) | gndA | 1795496..1796920 (-) | 1425 | WP_011837381.1 | NADP-dependent phosphogluconate dehydrogenase | - |
| SSA_RS08810 (SSA_1812) | dcm | 1797198..1798424 (-) | 1227 | WP_011837382.1 | DNA (cytosine-5-)-methyltransferase | - |
| SSA_RS08815 (SSA_1813) | - | 1798463..1799392 (-) | 930 | WP_011837383.1 | phospholipase D family protein | - |
| SSA_RS08820 (SSA_1814) | - | 1799389..1800069 (-) | 681 | WP_011837384.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 229 a.a. Molecular weight: 26309.29 Da Isoelectric Point: 5.0249
>NTDB_id=27533 SSA_RS08800 WP_011837380.1 1794797..1795486(-) (covR) [Streptococcus sanguinis SK36]
MAKRILLVENEKNLARFVSLELQKEGFLVDLAETGQEGLALAKDVDYDLLLLNYDLQDMTASDFAQQLSLIKPASVIIVL
ASREEIADQQEAIQHFAVSYVVKPFIISDLVERVSIIFRGRDFIDQHCSLLKIPTSYRNLRVDIKNHTVYRGEEVIALTR
REYDLLVTLMGSNKVMSREQLLERVWKYESATETNVVDVYIRYLRSKIDVEGQPSYIKTVRGVGYAMQE
MAKRILLVENEKNLARFVSLELQKEGFLVDLAETGQEGLALAKDVDYDLLLLNYDLQDMTASDFAQQLSLIKPASVIIVL
ASREEIADQQEAIQHFAVSYVVKPFIISDLVERVSIIFRGRDFIDQHCSLLKIPTSYRNLRVDIKNHTVYRGEEVIALTR
REYDLLVTLMGSNKVMSREQLLERVWKYESATETNVVDVYIRYLRSKIDVEGQPSYIKTVRGVGYAMQE
Nucleotide
Download Length: 690 bp
>NTDB_id=27533 SSA_RS08800 WP_011837380.1 1794797..1795486(-) (covR) [Streptococcus sanguinis SK36]
ATGGCAAAGCGAATTTTACTAGTAGAAAATGAAAAAAATCTTGCCCGATTTGTGAGTTTGGAACTGCAAAAGGAAGGCTT
TCTTGTAGATTTAGCTGAGACTGGTCAAGAGGGACTGGCTTTGGCTAAAGATGTGGATTATGACTTGCTCTTGCTCAACT
ATGATCTTCAAGATATGACTGCCAGCGATTTTGCTCAGCAGCTGAGCTTGATTAAGCCAGCGTCCGTCATTATCGTTCTG
GCTAGTCGCGAAGAGATTGCAGATCAGCAGGAAGCAATCCAGCATTTTGCTGTTTCCTACGTAGTCAAGCCTTTCATTAT
CAGTGATTTAGTGGAGCGTGTTTCTATCATTTTCCGCGGGCGCGACTTTATCGACCAGCACTGCAGCCTCTTAAAAATTC
CGACCTCTTATCGCAATCTGCGAGTGGATATTAAAAATCATACAGTTTACCGCGGTGAGGAAGTCATTGCACTGACGCGG
CGGGAGTACGATTTGCTGGTTACCCTGATGGGCAGCAATAAGGTTATGAGCCGTGAGCAACTGCTGGAGCGTGTCTGGAA
GTACGAGAGTGCAACCGAGACCAACGTTGTAGATGTTTATATTCGTTATCTGCGCAGTAAAATTGATGTGGAGGGGCAGC
CAAGCTATATCAAAACCGTTCGCGGTGTTGGTTATGCCATGCAAGAATAA
ATGGCAAAGCGAATTTTACTAGTAGAAAATGAAAAAAATCTTGCCCGATTTGTGAGTTTGGAACTGCAAAAGGAAGGCTT
TCTTGTAGATTTAGCTGAGACTGGTCAAGAGGGACTGGCTTTGGCTAAAGATGTGGATTATGACTTGCTCTTGCTCAACT
ATGATCTTCAAGATATGACTGCCAGCGATTTTGCTCAGCAGCTGAGCTTGATTAAGCCAGCGTCCGTCATTATCGTTCTG
GCTAGTCGCGAAGAGATTGCAGATCAGCAGGAAGCAATCCAGCATTTTGCTGTTTCCTACGTAGTCAAGCCTTTCATTAT
CAGTGATTTAGTGGAGCGTGTTTCTATCATTTTCCGCGGGCGCGACTTTATCGACCAGCACTGCAGCCTCTTAAAAATTC
CGACCTCTTATCGCAATCTGCGAGTGGATATTAAAAATCATACAGTTTACCGCGGTGAGGAAGTCATTGCACTGACGCGG
CGGGAGTACGATTTGCTGGTTACCCTGATGGGCAGCAATAAGGTTATGAGCCGTGAGCAACTGCTGGAGCGTGTCTGGAA
GTACGAGAGTGCAACCGAGACCAACGTTGTAGATGTTTATATTCGTTATCTGCGCAGTAAAATTGATGTGGAGGGGCAGC
CAAGCTATATCAAAACCGTTCGCGGTGTTGGTTATGCCATGCAAGAATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| covR | Streptococcus salivarius strain HSISS4 |
50 |
100 |
0.502 |
| covR | Lactococcus lactis subsp. lactis strain DGCC12653 |
48.908 |
100 |
0.489 |