Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | C7R87_RS07105 | Genome accession | NZ_CP027123 |
| Coordinates | 1228820..1229200 (+) | Length | 126 a.a. |
| NCBI ID | WP_000836911.1 | Uniprot ID | - |
| Organism | Acinetobacter baumannii strain AR_0056 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1223820..1234200
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C7R87_RS07075 (C7R87_1200) | kdsB | 1224723..1225484 (+) | 762 | WP_000680697.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| C7R87_RS07080 (C7R87_1201) | - | 1225496..1226476 (+) | 981 | WP_001075411.1 | DNA polymerase III subunit delta' | - |
| C7R87_RS07085 (C7R87_1202) | - | 1226488..1226829 (+) | 342 | WP_001183024.1 | PilZ domain-containing protein | - |
| C7R87_RS07090 (C7R87_1203) | - | 1226847..1227620 (+) | 774 | WP_000497298.1 | TatD family hydrolase | - |
| C7R87_RS07095 (C7R87_1204) | - | 1227658..1228266 (+) | 609 | WP_000375838.1 | TetR/AcrR family transcriptional regulator | - |
| C7R87_RS07100 (C7R87_1205) | - | 1228276..1228830 (+) | 555 | WP_000841373.1 | type II secretion system protein | - |
| C7R87_RS07105 (C7R87_1206) | xcpV | 1228820..1229200 (+) | 381 | WP_000836911.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| C7R87_RS07110 (C7R87_1207) | xcpW | 1229200..1229901 (+) | 702 | WP_000594589.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| C7R87_RS07115 (C7R87_1208) | gspK | 1229901..1230860 (+) | 960 | WP_000301476.1 | type II secretion system minor pseudopilin GspK | - |
| C7R87_RS07120 (C7R87_1209) | - | 1231091..1231687 (+) | 597 | WP_000908452.1 | 6-carboxytetrahydropterin synthase | - |
| C7R87_RS07125 (C7R87_1210) | ung | 1231738..1232451 (+) | 714 | WP_001177528.1 | uracil-DNA glycosylase | - |
| C7R87_RS07130 (C7R87_1211) | - | 1232448..1233572 (+) | 1125 | WP_001983908.1 | enoyl-CoA hydratase/isomerase family protein | - |
| C7R87_RS07135 (C7R87_1212) | tadA | 1233579..1234082 (+) | 504 | WP_000033178.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13975.20 Da Isoelectric Point: 9.8004
>NTDB_id=275113 C7R87_RS07105 WP_000836911.1 1228820..1229200(+) (xcpV) [Acinetobacter baumannii strain AR_0056]
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
MKSKGFTLLEVMVALAIFAVAAVALTKVAMQYTQSTSNAILRTKAQFVAMNEVAMMEINQEWLQGTQSKQVTSQGETWQI
DKSAQSTISPNVQKIDLQVSLYDPDKGKVQNGITHMVFFNYPVKAK
Nucleotide
Download Length: 381 bp
>NTDB_id=275113 C7R87_RS07105 WP_000836911.1 1228820..1229200(+) (xcpV) [Acinetobacter baumannii strain AR_0056]
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
ATGAAATCTAAAGGCTTTACCCTCTTAGAAGTTATGGTTGCTTTGGCAATCTTTGCAGTCGCAGCTGTCGCTTTAACTAA
AGTGGCAATGCAGTACACGCAGTCCACTTCAAATGCAATTTTGCGAACCAAAGCTCAATTTGTAGCAATGAATGAAGTTG
CTATGATGGAGATTAATCAAGAATGGTTGCAAGGAACCCAGAGTAAGCAAGTAACTTCCCAAGGTGAAACTTGGCAAATT
GATAAGTCAGCTCAATCTACTATTAGCCCGAATGTTCAAAAAATTGATTTACAAGTGAGTTTGTATGATCCGGATAAGGG
AAAAGTACAAAATGGCATTACTCATATGGTCTTTTTTAATTATCCAGTGAAAGCAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
100 |
100 |
1 |