Detailed information NTG0275114

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: C7R87_RS07110
• Genome accession: NZ_CP027123
• Coordinates: 1229200..1229901 (+)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AR_0056
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1224200..1234901

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C7R87_RS07075 (C7R87_1200)	kdsB	1224723..1225484 (+)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
C7R87_RS07080 (C7R87_1201)	-	1225496..1226476 (+)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
C7R87_RS07085 (C7R87_1202)	-	1226488..1226829 (+)	342	WP_001183024.1	PilZ domain-containing protein	-
C7R87_RS07090 (C7R87_1203)	-	1226847..1227620 (+)	774	WP_000497298.1	TatD family hydrolase	-
C7R87_RS07095 (C7R87_1204)	-	1227658..1228266 (+)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
C7R87_RS07100 (C7R87_1205)	-	1228276..1228830 (+)	555	WP_000841373.1	type II secretion system protein	-
C7R87_RS07105 (C7R87_1206)	xcpV	1228820..1229200 (+)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
C7R87_RS07110 (C7R87_1207)	xcpW	1229200..1229901 (+)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
C7R87_RS07115 (C7R87_1208)	gspK	1229901..1230860 (+)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
C7R87_RS07120 (C7R87_1209)	-	1231091..1231687 (+)	597	WP_000908452.1	6-carboxytetrahydropterin synthase	-
C7R87_RS07125 (C7R87_1210)	ung	1231738..1232451 (+)	714	WP_001177528.1	uracil-DNA glycosylase	-
C7R87_RS07130 (C7R87_1211)	-	1232448..1233572 (+)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
C7R87_RS07135 (C7R87_1212)	tadA	1233579..1234082 (+)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
C7R87_RS07140 (C7R87_1213)	-	1234152..1234595 (+)	444	WP_001246675.1	SRPBCC family protein	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=275114 C7R87_RS07110 WP_000594589.1 1229200..1229901(+) (xcpW) [Acinetobacter baumannii strain AR_0056]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=275114 C7R87_RS07110 WP_000594589.1 1229200..1229901(+) (xcpW) [Acinetobacter baumannii strain AR_0056]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996