Detailed information    

insolico Bioinformatically predicted

Overview

Name   rcrP   Type   Regulator
Locus tag   SSA_RS02400 Genome accession   NC_009009
Coordinates   463199..464965 (+) Length   588 a.a.
NCBI ID   WP_011836526.1    Uniprot ID   A3CL54
Organism   Streptococcus sanguinis SK36     
Function   regulate competence (predicted from homology)   
Competence regulation

Genomic Context

Location: 458199..469965
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SSA_RS02375 (SSA_0456) - 458735..460645 (+) 1911 WP_011836524.1 sucrose-specific PTS transporter subunit IIBC -
  SSA_RS02380 (SSA_0457) scrK 460803..461702 (+) 900 WP_002907200.1 fructokinase ScrK -
  SSA_RS02385 (SSA_0458) - 461749..462159 (+) 411 WP_011836525.1 peptide deformylase -
  SSA_RS02390 (SSA_0459) - 462238..462573 (+) 336 WP_002903845.1 hypothetical protein -
  SSA_RS02395 (SSA_0460) - 462748..463206 (+) 459 WP_002913878.1 MarR family winged helix-turn-helix transcriptional regulator -
  SSA_RS02400 (SSA_0461) rcrP 463199..464965 (+) 1767 WP_011836526.1 ABC transporter ATP-binding protein Regulator
  SSA_RS02405 (SSA_0462) rcrQ 464955..466712 (+) 1758 WP_011836527.1 ABC transporter ATP-binding protein Regulator
  SSA_RS02410 (SSA_0463) - 467005..468363 (+) 1359 WP_002917659.1 cobyrinate a,c-diamide synthase -
  SSA_RS02415 (SSA_0464) cbiB 468365..469315 (+) 951 WP_002898268.1 adenosylcobinamide-phosphate synthase CbiB -

Sequence

Protein


Download         Length: 588 a.a.        Molecular weight: 65204.53 Da        Isoelectric Point: 5.1854

>NTDB_id=27508 SSA_RS02400 WP_011836526.1 463199..464965(+) (rcrP) [Streptococcus sanguinis SK36]
MFKLFKRLTVREVSMIVLSVLFTFLTVYLELEVPTYISTITELLQTPGTGLADLWEPGLKMIGLSFASLLSAIVVGFFAA
RIAASFTQSLRSDIFNRVLDYSQTEIKKFSIPSLLTRTTNDITQVQTLITMGLQVVTRGPIMAIWAMTKIIGKSENWLTA
VLIAVLVNILLTVVLVTLAFPKQSVAQRLVDKLNSVTRESLTGIRVVRAYNAEDYQDEKFAAANDEVTRLNLFIGRLMAM
MNPVMMGISSGLTLAIYWIGAYLIQEAGLQERLPLFSDMVVFMSYAMQIVIGFLLMGALFIVLPRTIVSAGRINEVLDLH
SSITSPEHPKAASDSKGEVVFRDVSFRYAKNSEAVIEHVSFTAQAGDTVAFIGSTGSGKSTLVNLIPRFYDVTEGEILVD
GVNVQDYQLEDLHNKVGYIPQKAVLFSGDIESNLDFGQSKESPLDEQKMWDALDLAQAKPFVQEKEKGLKSEVAQSGTNF
SGGQRQRLAIARALARKPEILIFDDSFSALDYKTDRILRKELAERTQDMTKLIVAQRISTIMDADQILVLDAGKVVGQGT
HRELLASNEVYQEIAYSQLSKEELENGK

Nucleotide


Download         Length: 1767 bp        

>NTDB_id=27508 SSA_RS02400 WP_011836526.1 463199..464965(+) (rcrP) [Streptococcus sanguinis SK36]
ATGTTTAAGTTATTTAAACGGCTGACGGTAAGGGAAGTGAGCATGATTGTTCTCAGTGTGCTCTTCACCTTCCTAACGGT
ATATCTGGAATTAGAAGTTCCAACCTATATTTCGACGATTACAGAGCTATTGCAAACGCCGGGGACTGGTTTGGCAGATT
TGTGGGAGCCAGGTCTGAAAATGATCGGCCTGTCTTTTGCTAGCTTGCTGTCCGCTATTGTGGTTGGCTTTTTTGCCGCT
CGTATAGCAGCCAGCTTTACCCAGAGTTTGCGGAGCGATATTTTCAACCGTGTGCTAGACTATTCACAGACAGAGATTAA
GAAATTTTCAATCCCTAGTTTGCTGACTCGGACAACGAATGACATTACTCAGGTGCAAACTTTAATTACCATGGGACTGC
AGGTGGTGACCAGAGGACCGATTATGGCGATTTGGGCCATGACCAAGATTATCGGTAAGTCTGAGAACTGGCTGACAGCT
GTTCTCATTGCCGTTCTTGTTAATATCCTGCTGACGGTAGTTTTGGTGACATTGGCCTTTCCCAAGCAGTCAGTTGCGCA
GCGCTTGGTCGATAAGCTAAACAGCGTCACTAGAGAGAGTCTGACTGGGATTCGCGTGGTACGGGCTTACAATGCTGAGG
ATTATCAGGATGAGAAATTTGCGGCAGCCAATGATGAAGTAACCCGGCTCAATCTTTTCATCGGTCGTCTGATGGCTATG
ATGAATCCAGTTATGATGGGGATTTCCAGCGGATTGACACTGGCTATTTACTGGATTGGTGCTTATTTGATTCAGGAGGC
TGGACTGCAGGAGCGTCTCCCACTCTTCAGTGATATGGTCGTCTTTATGTCCTATGCTATGCAGATTGTGATTGGGTTCT
TGCTCATGGGTGCCCTCTTCATCGTCCTGCCTCGGACCATTGTATCGGCTGGCCGGATTAATGAAGTACTGGACCTGCAT
TCTTCTATCACCAGTCCAGAACATCCTAAGGCAGCATCGGATAGCAAGGGAGAAGTGGTCTTTCGAGATGTGTCCTTCCG
CTATGCTAAGAATTCTGAAGCGGTCATTGAGCATGTCAGCTTTACAGCGCAGGCTGGTGATACTGTGGCCTTTATCGGCT
CAACTGGTTCAGGGAAATCCACACTTGTCAATCTCATCCCTCGTTTCTACGATGTGACTGAAGGAGAGATTCTGGTAGAT
GGTGTCAATGTTCAGGATTACCAGCTGGAAGATCTGCATAATAAGGTCGGCTACATCCCGCAAAAGGCTGTGCTTTTCTC
TGGCGATATTGAGAGCAATCTGGACTTCGGTCAAAGCAAAGAAAGCCCGCTGGATGAGCAGAAAATGTGGGATGCTCTTG
ATCTAGCACAGGCTAAGCCCTTTGTCCAAGAGAAGGAAAAAGGGCTCAAGTCAGAAGTGGCTCAAAGCGGGACCAACTTC
TCTGGTGGTCAGCGTCAACGTTTGGCTATTGCCAGAGCTTTGGCTCGTAAGCCAGAAATCCTTATCTTTGACGACTCCTT
CTCAGCCCTAGACTATAAGACAGACCGCATTTTGCGTAAGGAACTGGCTGAGCGGACGCAGGATATGACCAAGCTAATCG
TGGCGCAGCGGATTTCTACTATCATGGATGCGGATCAAATCTTGGTCTTGGATGCTGGTAAGGTTGTCGGTCAAGGTACT
CACCGAGAGCTTTTGGCCAGCAACGAAGTCTATCAAGAAATTGCATACTCACAACTATCCAAGGAGGAATTAGAAAATGG
AAAATAA

Domains

Predicted by InterproScan.

ABC transporter transmembrane region (ABC_membrane)

(19-290)

ABC transporter (ABC_tran)

(357-506)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A3CL54

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rcrP Streptococcus mutans UA159

68.167

100

0.696

Multiple sequence alignment