Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | C5695_RS00585 | Genome accession | NZ_CP027116 |
| Coordinates | 106691..109126 (+) | Length | 811 a.a. |
| NCBI ID | WP_117728237.1 | Uniprot ID | A0AAD0MKC4 |
| Organism | Bacillus pumilus strain 145 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 101691..114126
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5695_RS00570 (C5695_00570) | - | 104562..105026 (+) | 465 | WP_034323278.1 | CtsR family transcriptional regulator | - |
| C5695_RS00575 (C5695_00575) | - | 105041..105598 (+) | 558 | WP_117728233.1 | UvrB/UvrC motif-containing protein | - |
| C5695_RS00580 (C5695_00580) | - | 105603..106694 (+) | 1092 | WP_117728235.1 | protein arginine kinase | - |
| C5695_RS00585 (C5695_00585) | clpC | 106691..109126 (+) | 2436 | WP_117728237.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| C5695_RS00590 (C5695_00590) | radA | 109220..110599 (+) | 1380 | WP_117728239.1 | DNA repair protein RadA | Machinery gene |
| C5695_RS00595 (C5695_00595) | disA | 110602..111681 (+) | 1080 | WP_024425581.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| C5695_RS00600 (C5695_00600) | - | 111835..112935 (+) | 1101 | WP_117732955.1 | PIN/TRAM domain-containing protein | - |
| C5695_RS00605 (C5695_00605) | ispD | 112949..113638 (+) | 690 | WP_117728241.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| C5695_RS00610 (C5695_00610) | ispF | 113642..114118 (+) | 477 | WP_117728243.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 811 a.a. Molecular weight: 90069.77 Da Isoelectric Point: 6.2469
>NTDB_id=275029 C5695_RS00585 WP_117728237.1 106691..109126(+) (clpC) [Bacillus pumilus strain 145]
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIEKGQHIVLDVEDG
EIVVKATAATN
MMFGRFTERAQKVLALAQEEAIRLGHKNIGTEHILLGLVREGEGIAAKALEALGLVSDKIQKEVESLIGRGQEVSQAIPH
YTPRAKKVTELSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGSNSNAN
TPTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIIHNEVPEILRDKRV
MTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDE
YRKYIEKDAALERRFQPIQVDQPSVDESIQILRGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAG
SKVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREKVEVTKKSWKEKQGQENSEVSVDDIAMV
VSSWTGVPVSKIAQTETDKLLNMEQLLHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALA
ESIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRL
TDSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDESQNYKDMKGKVMGELKRAFRPEFINRIDEIIVFHSLEKKHL
KEIVSLMSDQLTKRLKEQDLSIELTEAAKAKIADEGVDLEYGARPLRRAIQKHVEDRLSEELLRGNIEKGQHIVLDVEDG
EIVVKATAATN
Nucleotide
Download Length: 2436 bp
>NTDB_id=275029 C5695_RS00585 WP_117728237.1 106691..109126(+) (clpC) [Bacillus pumilus strain 145]
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATTGGTACTGAGCACATTTTACTAGGCCTAGTACGTGAAGGTGAGGGCATAGCTGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCAAAGAAGGTTACCGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGCGAGGGAGAGGGTGTAGCTGCCCGCGTTTTAAATAACCTTGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTACAGTTGCTTGGAAGCAATGAAACGGGTTCGTCTGCGGCAGGCTCTAATAGCAATGCGAAC
ACACCAACACTAGATAGCTTGGCAAGAGATTTAACGGCTATTGCGAAAGAGGATAGCTTGGACCCTGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTCATTGAGGTTCTAAGTAGAAGAACAAAAAATAACCCTGTGTTGATTGGTGAGCCTGGTGTAG
GTAAAACAGCCATCGCTGAAGGTCTTGCACAGCAAATTATTCATAACGAAGTGCCAGAAATCCTGCGCGATAAACGAGTG
ATGACACTTGATATGGGAACGGTTGTAGCCGGAACAAAATATCGTGGTGAATTTGAGGATCGTTTGAAAAAAGTTATGGA
TGAAATTCGTCAGGCAGGAAATATCATTCTCTTTATCGATGAGCTTCATACACTGATTGGTGCTGGTGGAGCAGAGGGTG
CGATTGATGCATCTAATATTCTAAAACCATCCTTAGCACGTGGTGAGTTACAATGTATCGGAGCAACAACCTTAGATGAG
TATCGTAAATATATTGAAAAGGATGCTGCGCTTGAGCGACGTTTCCAGCCAATTCAAGTGGATCAGCCGTCTGTTGATGA
AAGTATTCAAATCTTAAGAGGACTTAGAGATCGTTATGAAGCACATCATCGTGTGTCTATTACAGATGAAGCGATTGAGG
CAGCGGTAAAGCTATCTGACCGTTATATCTCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTCTGCGTTCTTTCACAACACCACCTAATCTAAAGGAACTAGAACAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCTGTTCAAAGTCAGGAATTTGAAAAAGCAGCTTCCCTTCGCGATACAGAGCAGCGTTTACGTGAAAAAG
TAGAGGTTACAAAGAAATCATGGAAAGAAAAGCAGGGCCAAGAGAATTCAGAGGTATCTGTAGATGATATCGCAATGGTT
GTCTCTAGCTGGACGGGAGTACCTGTTTCGAAAATTGCTCAAACGGAAACAGATAAGCTTCTCAATATGGAACAATTACT
CCATTCTCGTGTGATCGGGCAGGATGAAGCGGTTGTCGCTGTAGCTAAAGCTGTGAGACGTGCGCGTGCAGGCCTGAAAG
ATCCAAAACGTCCGATTGGCTCCTTTATCTTCTTAGGTCCAACAGGGGTTGGTAAAACGGAGCTTGCAAGAGCCCTGGCT
GAGTCTATTTTCGGTGATGAAGAAGCAATGATCCGAATTGATATGTCTGAATACATGGAGAAGCACTCTACATCTAGACT
TGTTGGGTCACCTCCAGGCTATGTCGGTTATGATGAAGGCGGACAGCTGACGGAAAAAGTGAGAAGAAAACCTTATTCTG
TTGTGCTTTTAGACGAGATTGAAAAGGCGCATCCAGATGTATTTAATATCTTACTGCAAGTGTTAGAAGATGGACGTCTT
ACTGATTCTAAAGGGCGTACCGTTGACTTTAGAAATACGATTTTGATCATGACATCCAACGTTGGAGCTAGTGAACTGAA
GAGAAATAAATATGTTGGCTTTAACGTGCAGGATGAAAGTCAGAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCTGAGTTCATCAACCGTATTGATGAAATCATTGTCTTTCACTCACTTGAAAAGAAACATCTG
AAGGAAATCGTATCTCTTATGTCTGATCAATTGACGAAACGATTAAAAGAACAAGACCTTTCAATCGAATTAACGGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTAGATCTTGAGTACGGCGCGCGTCCATTAAGAAGAGCGATTCAAAAGCATG
TGGAGGATCGACTTTCTGAGGAGCTTCTGAGGGGGAATATTGAAAAAGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCGACGGCTGCTACGAACTAA
ATGATGTTTGGAAGATTCACTGAAAGAGCTCAAAAGGTATTAGCACTTGCACAAGAAGAAGCCATTCGCCTAGGCCATAA
GAACATTGGTACTGAGCACATTTTACTAGGCCTAGTACGTGAAGGTGAGGGCATAGCTGCAAAAGCATTAGAAGCACTGG
GCCTTGTTTCAGATAAAATCCAAAAAGAAGTCGAAAGCTTGATTGGAAGAGGGCAAGAGGTGTCTCAAGCTATTCCTCAT
TATACGCCTAGAGCAAAGAAGGTTACCGAGCTTTCAATGGATGAAGCAAGAAAGCTAGGTCATTCCTATGTAGGGACAGA
ACATATTCTATTAGGTCTTATTCGCGAGGGAGAGGGTGTAGCTGCCCGCGTTTTAAATAACCTTGGAGTGAGCTTAAATA
AAGCACGTCAGCAAGTCCTACAGTTGCTTGGAAGCAATGAAACGGGTTCGTCTGCGGCAGGCTCTAATAGCAATGCGAAC
ACACCAACACTAGATAGCTTGGCAAGAGATTTAACGGCTATTGCGAAAGAGGATAGCTTGGACCCTGTCATTGGCCGAAG
CAAAGAAATTCAACGTGTCATTGAGGTTCTAAGTAGAAGAACAAAAAATAACCCTGTGTTGATTGGTGAGCCTGGTGTAG
GTAAAACAGCCATCGCTGAAGGTCTTGCACAGCAAATTATTCATAACGAAGTGCCAGAAATCCTGCGCGATAAACGAGTG
ATGACACTTGATATGGGAACGGTTGTAGCCGGAACAAAATATCGTGGTGAATTTGAGGATCGTTTGAAAAAAGTTATGGA
TGAAATTCGTCAGGCAGGAAATATCATTCTCTTTATCGATGAGCTTCATACACTGATTGGTGCTGGTGGAGCAGAGGGTG
CGATTGATGCATCTAATATTCTAAAACCATCCTTAGCACGTGGTGAGTTACAATGTATCGGAGCAACAACCTTAGATGAG
TATCGTAAATATATTGAAAAGGATGCTGCGCTTGAGCGACGTTTCCAGCCAATTCAAGTGGATCAGCCGTCTGTTGATGA
AAGTATTCAAATCTTAAGAGGACTTAGAGATCGTTATGAAGCACATCATCGTGTGTCTATTACAGATGAAGCGATTGAGG
CAGCGGTAAAGCTATCTGACCGTTATATCTCTGATCGTTTCCTTCCAGATAAGGCGATTGATTTAATTGATGAGGCAGGT
TCGAAAGTCCGTCTGCGTTCTTTCACAACACCACCTAATCTAAAGGAACTAGAACAAAAGCTGGATGAAGTACGCAAGGA
AAAGGATGCAGCTGTTCAAAGTCAGGAATTTGAAAAAGCAGCTTCCCTTCGCGATACAGAGCAGCGTTTACGTGAAAAAG
TAGAGGTTACAAAGAAATCATGGAAAGAAAAGCAGGGCCAAGAGAATTCAGAGGTATCTGTAGATGATATCGCAATGGTT
GTCTCTAGCTGGACGGGAGTACCTGTTTCGAAAATTGCTCAAACGGAAACAGATAAGCTTCTCAATATGGAACAATTACT
CCATTCTCGTGTGATCGGGCAGGATGAAGCGGTTGTCGCTGTAGCTAAAGCTGTGAGACGTGCGCGTGCAGGCCTGAAAG
ATCCAAAACGTCCGATTGGCTCCTTTATCTTCTTAGGTCCAACAGGGGTTGGTAAAACGGAGCTTGCAAGAGCCCTGGCT
GAGTCTATTTTCGGTGATGAAGAAGCAATGATCCGAATTGATATGTCTGAATACATGGAGAAGCACTCTACATCTAGACT
TGTTGGGTCACCTCCAGGCTATGTCGGTTATGATGAAGGCGGACAGCTGACGGAAAAAGTGAGAAGAAAACCTTATTCTG
TTGTGCTTTTAGACGAGATTGAAAAGGCGCATCCAGATGTATTTAATATCTTACTGCAAGTGTTAGAAGATGGACGTCTT
ACTGATTCTAAAGGGCGTACCGTTGACTTTAGAAATACGATTTTGATCATGACATCCAACGTTGGAGCTAGTGAACTGAA
GAGAAATAAATATGTTGGCTTTAACGTGCAGGATGAAAGTCAGAATTACAAGGATATGAAAGGCAAAGTGATGGGCGAGT
TGAAACGTGCGTTTAGACCTGAGTTCATCAACCGTATTGATGAAATCATTGTCTTTCACTCACTTGAAAAGAAACATCTG
AAGGAAATCGTATCTCTTATGTCTGATCAATTGACGAAACGATTAAAAGAACAAGACCTTTCAATCGAATTAACGGAAGC
AGCAAAAGCGAAGATTGCCGACGAAGGTGTAGATCTTGAGTACGGCGCGCGTCCATTAAGAAGAGCGATTCAAAAGCATG
TGGAGGATCGACTTTCTGAGGAGCTTCTGAGGGGGAATATTGAAAAAGGTCAACATATCGTATTAGATGTGGAAGATGGA
GAAATTGTCGTAAAAGCGACGGCTGCTACGAACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
96.301 |
100 |
0.963 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
49.506 |
99.877 |
0.494 |
| clpC | Streptococcus thermophilus LMD-9 |
46.368 |
100 |
0.472 |
| clpC | Streptococcus thermophilus LMG 18311 |
46.005 |
100 |
0.469 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.556 |
99.877 |
0.455 |
| clpC | Streptococcus pneumoniae Rx1 |
45.432 |
99.877 |
0.454 |
| clpC | Streptococcus pneumoniae D39 |
45.432 |
99.877 |
0.454 |
| clpC | Streptococcus mutans UA159 |
43.675 |
100 |
0.451 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
49.088 |
87.916 |
0.432 |
| clpE | Streptococcus mutans UA159 |
53.323 |
79.778 |
0.425 |
| clpE | Streptococcus pneumoniae TIGR4 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae Rx1 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae D39 |
52.713 |
79.531 |
0.419 |
| clpE | Streptococcus pneumoniae R6 |
52.713 |
79.531 |
0.419 |