Detailed information NTG0274886

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: D2M30_RS17445
• Genome accession: NZ_CP032146
• Coordinates: 3417687..3420560 (-)
• Length: 957 a.a.
• NCBI ID: WP_013353756.1
• Uniprot ID: A0A9P1NIW4
• Organism: Bacillus amyloliquefaciens strain YP6
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3412687..3425560

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
D2M30_RS17420 (D2M30_17445)	-	3415195..3415554 (-)	360	WP_013353752.1	phage holin family protein	-
D2M30_RS17425 (D2M30_17450)	-	3415555..3415749 (-)	195	WP_003151448.1	PspC domain-containing protein	-
D2M30_RS17430 (D2M30_17455)	-	3415755..3416852 (-)	1098	WP_125123314.1	DUF4097 domain-containing protein	-
D2M30_RS17435 (D2M30_17460)	-	3416876..3417202 (-)	327	WP_025649342.1	hypothetical protein	-
D2M30_RS17440 (D2M30_17465)	-	3417400..3417639 (+)	240	WP_125123315.1	hypothetical protein	-
D2M30_RS17445 (D2M30_17470)	uvrA	3417687..3420560 (-)	2874	WP_013353756.1	excinuclease ABC subunit UvrA	Machinery gene
D2M30_RS17450 (D2M30_17475)	uvrB	3420568..3422553 (-)	1986	WP_065522323.1	excinuclease ABC subunit UvrB	Machinery gene
D2M30_RS17455 (D2M30_17480)	-	3422729..3422965 (-)	237	WP_003151438.1	CsbA family protein	-

Sequence

Protein

• Length: 957 a.a.
• Molecular weight: 106089.33 Da
• Isoelectric Point: 6.3466

>NTDB_id=274886 D2M30_RS17445 WP_013353756.1 3417687..3420560(-) (uvrA) [Bacillus amyloliquefaciens strain YP6]
MAIDRIEVKGARAHNLKNIDVTIPRDQLVVVTGLSGSGKSSLAFDTIYAEGQRRYVESLSAYARQFLGQMDKPDVDAIEG
LSPAISIDQKTTSRNPRSTVGTVTEIYDYLRLLYARVGKPHCPEHGIEITSQTIEQMVDRILEYPERTKLQVLAPIISGR
KGAHVKVLDQIRKQGYVRVRIDGEMAELSDEIELEKNKKHSIEVVIDRIVVKEGVAARLSDSLETALRLGEGRVMIDVIG
QEELMFSEHHACPMCGFSIGELEPRLFSFNSPFGACPTCDGLGLKLEVDPELVIPNPELSLKEHAIAPWTPISSQYYPQL
LQAVCTHYGIDMETPVKDLPNHQLDKVLYGSGNERIYFKYENDFGQVRENEIEFEGVLRNIERRYKETSSDYIREQMEQY
MSQKPCPTCKGYRLKKEALAVLVNGRHIGTITELSVGDALEFFKNLTLSEKDMQIADLILREIVERLSFLDKVGLDYLTL
SRAAGTLSGGEAQRIRLATQIGSRLSGVLYILDEPSIGLHQRDNDRLISALKNMRDLGNTLIVVEHDEDTMMAADYLIDI
GPGAGIHGGRVISAGTPEEVMNDADSLTGRYLSGAQFIPMPPERRKPDGRFIEIKGASENNLKKANAKFPLGTFTAVTGV
SGSGKSTLVNEILHKALAQKLHKAKAKPGSHKEIKGLDHLDKVIDIDQAPIGRTPRSNPATYTGVFDDIRDVFAQTNEAK
VRGYKKGRFSFNVKGGRCEACRGDGIIKIEMHFLPDVYVPCEVCHGKRYNRETLEVTYKGKSISDVLDMTVEDALSFFEN
IPKIKRKLQTLADVGLGYVTLGQPATTLSGGEAQRVKLASELHKRSTGRTLYILDEPTTGLHVDDIARLLVVLQRLVDNG
DTVLVIEHNLDIIKTADYIVDLGPEGGAGGGTIVASGTPEEVVEVKESYTGRYLKPVMERDKKRMKTLLAEKETAAT

Nucleotide

• Length: 2874 bp

>NTDB_id=274886 D2M30_RS17445 WP_013353756.1 3417687..3420560(-) (uvrA) [Bacillus amyloliquefaciens strain YP6]
ATGGCAATTGACCGGATTGAGGTGAAAGGGGCAAGGGCGCATAATTTAAAAAACATTGATGTAACGATTCCGCGGGATCA
GCTCGTCGTCGTGACGGGTCTGTCAGGATCGGGAAAATCATCCCTTGCTTTTGACACCATTTACGCGGAAGGACAGAGGC
GGTATGTTGAATCGCTTTCCGCCTATGCGCGCCAATTTTTAGGGCAGATGGATAAGCCGGACGTTGATGCGATCGAAGGG
CTTTCTCCGGCCATCAGCATTGACCAGAAAACGACAAGCCGCAATCCGCGGTCAACCGTCGGAACGGTAACGGAGATTTA
TGATTATCTGCGGCTGTTATACGCGAGAGTCGGGAAGCCGCACTGCCCGGAGCACGGGATCGAAATTACGTCTCAAACGA
TTGAACAGATGGTTGACCGGATTCTTGAATATCCGGAGCGGACGAAGCTTCAAGTGCTCGCGCCGATTATCTCCGGCAGA
AAAGGCGCCCACGTCAAAGTGCTTGACCAAATCAGAAAGCAAGGTTACGTAAGAGTCCGGATTGACGGAGAAATGGCCGA
GCTTTCCGACGAGATCGAACTTGAAAAAAATAAAAAGCATTCCATTGAAGTAGTCATTGACCGGATTGTCGTCAAGGAAG
GCGTTGCCGCCCGGCTTTCCGACTCACTGGAAACCGCGCTCCGCTTAGGAGAAGGCCGAGTCATGATTGATGTCATCGGC
CAGGAAGAGCTGATGTTCAGCGAGCATCACGCCTGTCCGATGTGCGGTTTTTCAATCGGTGAGCTTGAGCCCCGGCTGTT
TTCGTTTAACAGCCCGTTCGGCGCCTGTCCGACATGCGACGGTCTTGGCTTGAAGCTGGAAGTGGATCCTGAACTCGTCA
TTCCAAATCCTGAGCTGTCATTAAAGGAACACGCCATAGCCCCGTGGACGCCGATCAGTTCACAATATTATCCGCAGCTG
CTTCAGGCGGTCTGCACTCATTACGGCATTGATATGGAGACTCCGGTCAAAGACCTGCCGAATCATCAGCTTGATAAAGT
GCTCTACGGCAGCGGCAATGAACGGATCTACTTTAAATACGAGAATGATTTCGGACAAGTGCGGGAAAATGAAATTGAGT
TTGAAGGTGTGCTGCGCAATATTGAGAGACGGTATAAAGAGACAAGCTCCGATTATATCCGTGAACAGATGGAGCAGTAC
ATGTCACAGAAGCCGTGCCCGACGTGCAAAGGCTACCGGCTGAAGAAAGAAGCGCTGGCCGTTTTGGTCAACGGACGCCA
CATCGGAACTATTACTGAGCTTTCCGTCGGCGATGCGCTGGAATTTTTCAAAAACCTGACGCTGTCTGAGAAAGATATGC
AGATTGCCGATTTAATTTTAAGAGAAATTGTGGAGCGGCTCAGTTTCTTAGATAAAGTCGGTCTAGATTATCTGACGCTG
AGCCGGGCGGCGGGGACGCTGTCAGGCGGAGAAGCCCAGCGTATCAGGCTTGCGACGCAGATCGGCTCCCGTTTGTCAGG
CGTCCTGTACATTCTGGATGAGCCGTCTATCGGCCTTCACCAGCGTGACAATGACCGTCTGATCAGCGCGCTGAAAAACA
TGAGAGATCTCGGCAACACACTGATCGTCGTTGAGCATGATGAAGATACGATGATGGCTGCCGATTATTTGATAGACATC
GGCCCCGGCGCCGGCATTCACGGCGGCCGTGTCATATCCGCGGGCACGCCCGAAGAGGTAATGAATGATGCGGATTCTCT
GACCGGACGTTATTTATCAGGGGCTCAATTCATCCCGATGCCTCCGGAGAGAAGAAAGCCTGACGGCCGATTCATTGAAA
TTAAAGGCGCTTCAGAAAACAACCTGAAAAAAGCGAACGCCAAATTCCCGCTCGGCACTTTTACGGCGGTGACAGGTGTG
TCCGGTTCCGGAAAAAGCACGCTTGTGAACGAAATTTTGCATAAGGCGCTTGCGCAAAAACTTCATAAAGCCAAAGCGAA
ACCGGGAAGCCATAAAGAGATCAAAGGCCTCGATCATCTTGATAAGGTGATCGACATCGATCAGGCGCCGATCGGCCGGA
CACCGAGATCAAATCCGGCAACTTACACGGGCGTGTTTGATGATATCCGCGATGTGTTCGCGCAGACAAATGAAGCGAAG
GTGCGCGGCTACAAAAAGGGCCGATTCAGCTTTAATGTAAAAGGCGGGCGCTGTGAAGCCTGCCGCGGCGACGGCATCAT
CAAAATTGAGATGCACTTCCTTCCCGACGTGTACGTCCCGTGCGAAGTGTGCCACGGCAAACGTTACAACCGGGAGACGC
TTGAGGTCACATACAAAGGAAAAAGCATTTCTGACGTTCTGGATATGACGGTGGAAGATGCTCTGTCTTTCTTTGAAAAT
ATCCCGAAAATCAAACGCAAGCTTCAAACGCTTGCCGATGTTGGACTTGGGTATGTGACGCTCGGTCAGCCGGCGACGAC
GCTGTCAGGCGGAGAAGCGCAGCGCGTGAAGCTTGCTTCCGAACTGCATAAGCGCTCCACCGGACGGACGCTGTATATTT
TGGACGAACCGACGACAGGCCTCCACGTCGATGATATCGCACGGCTTTTGGTCGTGCTTCAAAGACTCGTTGATAACGGG
GATACCGTTTTGGTCATTGAACACAATCTCGATATCATAAAAACGGCGGACTACATCGTAGATCTGGGACCTGAAGGCGG
CGCGGGCGGCGGCACGATCGTAGCCTCAGGGACACCAGAAGAAGTTGTCGAAGTGAAAGAATCATATACAGGCCGCTATC
TGAAACCGGTAATGGAACGTGATAAAAAACGGATGAAAACATTGCTGGCCGAAAAAGAAACGGCAGCCACGTAA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (622-858)

• UvrA interaction domain (UvrA_inter) (132-238)

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-399)

3D structure

• AlphaFold DB: A0A9P1NIW4

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	69.091	97.701	0.675
uvrA	Streptococcus pneumoniae TIGR4	69.091	97.701	0.675
uvrA	Streptococcus pneumoniae D39	69.091	97.701	0.675