Detailed information    

insolico Bioinformatically predicted

Overview


Name   sinI   Type   Regulator
Locus tag   C5I45_RS07735 Genome accession   NZ_CP027061
Coordinates   1466618..1466791 (-) Length   57 a.a.
NCBI ID   WP_003153105.1    Uniprot ID   A7Z6M7
Organism   Bacillus sp. ZY-1-1     
Function   inhibit the expression of sinR (predicted from homology)   
Competence regulation

Genomic Context


Location: 1461618..1471791
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5I45_RS07685 (C5I45_07675) comGD 1461739..1462176 (+) 438 WP_025852922.1 competence type IV pilus minor pilin ComGD Machinery gene
  C5I45_RS07690 (C5I45_07680) comGE 1462160..1462474 (+) 315 WP_015388003.1 competence type IV pilus minor pilin ComGE Machinery gene
  C5I45_RS07695 (C5I45_07685) comGF 1462383..1462883 (+) 501 WP_226565836.1 competence type IV pilus minor pilin ComGF -
  C5I45_RS07700 (C5I45_07690) comGG 1462884..1463261 (+) 378 WP_014305410.1 competence type IV pilus minor pilin ComGG Machinery gene
  C5I45_RS07705 (C5I45_07695) - 1463318..1463497 (+) 180 WP_003153093.1 YqzE family protein -
  C5I45_RS07710 (C5I45_07700) - 1463537..1463866 (-) 330 WP_003153097.1 DUF3889 domain-containing protein -
  C5I45_RS07715 (C5I45_07705) tapA 1464125..1464796 (+) 672 WP_014305409.1 amyloid fiber anchoring/assembly protein TapA -
  C5I45_RS07720 (C5I45_07710) - 1464768..1465352 (+) 585 WP_025852917.1 signal peptidase I -
  C5I45_RS07725 (C5I45_07715) - 1465416..1466201 (+) 786 WP_003153102.1 TasA family protein -
  C5I45_RS07730 (C5I45_07720) sinR 1466249..1466584 (-) 336 WP_003153104.1 transcriptional regulator SinR Regulator
  C5I45_RS07735 (C5I45_07725) sinI 1466618..1466791 (-) 174 WP_003153105.1 anti-repressor SinI family protein Regulator
  C5I45_RS07740 (C5I45_07730) - 1466968..1467762 (-) 795 WP_014305407.1 YqhG family protein -
  C5I45_RS07745 (C5I45_07735) - 1467780..1469450 (-) 1671 WP_003153107.1 SNF2-related protein -
  C5I45_RS07750 (C5I45_07740) gcvT 1469873..1470973 (+) 1101 WP_003153108.1 glycine cleavage system aminomethyltransferase GcvT -

Sequence


Protein


Download         Length: 57 a.a.        Molecular weight: 6695.72 Da        Isoelectric Point: 9.8170

>NTDB_id=274813 C5I45_RS07735 WP_003153105.1 1466618..1466791(-) (sinI) [Bacillus sp. ZY-1-1]
MKNAKMEFSQLDKEWVELILEAQKANISLEEIRKYLLSHKKSSQHIQAARSHTVNPF

Nucleotide


Download         Length: 174 bp        

>NTDB_id=274813 C5I45_RS07735 WP_003153105.1 1466618..1466791(-) (sinI) [Bacillus sp. ZY-1-1]
ATGAAAAATGCAAAAATGGAATTTTCGCAATTAGATAAGGAATGGGTTGAGCTGATATTAGAAGCCCAAAAAGCAAATAT
CAGCCTAGAAGAAATACGCAAATACCTGCTTTCGCATAAAAAGTCTTCTCAACATATCCAGGCAGCCAGAAGTCATACCG
TAAATCCTTTCTGA

Domains


Predicted by InterproScan.

(11-37)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A7Z6M7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sinI Bacillus subtilis subsp. subtilis str. 168

70.175

100

0.702


Multiple sequence alignment