Detailed information NTG0274804

Bioinformatically predicted

Overview

• Name: comEC
• Type: Machinery gene
• Locus tag: C5I45_RS07260
• Genome accession: NZ_CP027061
• Coordinates: 1384541..1386892 (+)
• Length: 783 a.a.
• NCBI ID: WP_107994305.1
• Uniprot ID: -
• Organism: Bacillus sp. ZY-1-1
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1379541..1391892

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C5I45_RS07220 (C5I45_07210)	yhbY	1379813..1380103 (+)	291	WP_003152858.1	ribosome assembly RNA-binding protein YhbY	-
C5I45_RS07225 (C5I45_07215)	-	1380114..1380683 (+)	570	WP_003152860.1	nicotinate-nucleotide adenylyltransferase	-
C5I45_RS07230 (C5I45_07220)	yqeK	1380673..1381254 (+)	582	WP_107994303.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
C5I45_RS07235 (C5I45_07225)	rsfS	1381251..1381607 (+)	357	WP_003152864.1	ribosome silencing factor	-
C5I45_RS07240 (C5I45_07230)	-	1381604..1382341 (+)	738	WP_107994304.1	class I SAM-dependent methyltransferase	-
C5I45_RS07245 (C5I45_07235)	comER	1382410..1383231 (-)	822	WP_014305449.1	late competence protein ComER	-
C5I45_RS07250 (C5I45_07240)	comEA	1383290..1383904 (+)	615	WP_015387983.1	helix-hairpin-helix domain-containing protein	Machinery gene
C5I45_RS07255 (C5I45_07245)	-	1383971..1384540 (+)	570	WP_003152868.1	ComE operon protein 2	-
C5I45_RS07260 (C5I45_07250)	comEC	1384541..1386892 (+)	2352	WP_107994305.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
C5I45_RS07265 (C5I45_07255)	-	1386911..1387045 (-)	135	WP_003152870.1	YqzM family protein	-
C5I45_RS07270 (C5I45_07260)	holA	1387280..1388321 (+)	1042	Protein_1401	DNA polymerase III subunit delta	-
C5I45_RS07275 (C5I45_07265)	rpsT	1388338..1388604 (-)	267	WP_003152876.1	30S ribosomal protein S20	-
C5I45_RS07280 (C5I45_07270)	gpr	1388807..1389913 (+)	1107	WP_003152878.1	GPR endopeptidase	-
C5I45_RS07285 (C5I45_07275)	-	1389981..1391174 (+)	1194	WP_003152880.1	stage II sporulation protein P	-
C5I45_RS07290 (C5I45_07280)	-	1391191..1391529 (+)	339	WP_003152882.1	YqxA family protein	-

Sequence

Protein

• Length: 783 a.a.
• Molecular weight: 86607.62 Da
• Isoelectric Point: 9.0078

>NTDB_id=274804 C5I45_RS07260 WP_107994305.1 1384541..1386892(+) (comEC) [Bacillus sp. ZY-1-1]
MKYKYLLLPLAAVSATAGIAAAHVFWVLLLFLLYLLFIMIKTKQPAPVIICLVSFCVYFFLYTVCDAANVTRYQAGSYTE
QAVITNIPKVDGAKMSAVIRTHDKEKWAASYKIRSLEEKRLIEQLEPGMRCTFTGSLEQPAHATIPGGFDYKEYLYSQQI
HWLFTVTSIQQCEKSKQPLFKLLSIRKNLISIIRNHVPESSAGIVEALTLGERFSIEDDILSAYQNLGVVHLMAISGMHV
GLITAGLFYALIRIGLTREKAGMLLLLFLPVYTLLSGAAPSVLRASLMLGFYIAGTLVKRGIHSSAALSLSYLLLLLFNP
YLLWQAGFQLSFAVSASLILSSSILKKAGKSRLAGLAMASFIAELSSLPFLLYHFQQISLASFPMNMVMVPFYTLFVIPV
SVIGFLLLLLSRQMGECLFNMFDLVMKPVHDFITYAASVDLFTVIVLKPDFLSLLLLAVSIFTLFAALEKGGFLKLRKSA
LFFCAVLAYLICRPYFSPWGEADMLDIGQGDSLFISAPHRKGTVMVDTGGVIAYPGESWKEKRHPYSIGEKVLIPFLNGK
GVKKLDALILTHADQDHIGEAGVLIKNHRVKRLIVPVGFVKEPKDQNILNMAKENNIPVAEAKRGDTITAGDLQFQVLSP
ESSDGKSKNDSSLVLWTVLGGVSWLLTGDLESDGETEVLKTYPKLKADILKAGHHGSKSSTGEAFLKQLQPEAALISAGK
ENRYHHPHEEVLDRLKAYSVNVLRTDISGTIQYRFEKGAGTFSVFPPYDIEETRAQEVKKTAD

Nucleotide

• Length: 2352 bp

>NTDB_id=274804 C5I45_RS07260 WP_107994305.1 1384541..1386892(+) (comEC) [Bacillus sp. ZY-1-1]
ATGAAATATAAATACCTTCTTCTGCCTCTGGCGGCGGTATCTGCAACTGCGGGGATTGCCGCCGCTCATGTCTTCTGGGT
TCTGCTCCTTTTTCTTCTGTATCTTCTCTTTATTATGATAAAAACAAAGCAGCCTGCTCCGGTTATCATCTGCCTCGTTT
CTTTTTGTGTTTATTTCTTTCTTTATACGGTTTGTGACGCTGCGAATGTAACGCGGTATCAGGCCGGCAGTTATACTGAA
CAGGCCGTCATCACTAATATTCCGAAGGTTGACGGAGCGAAAATGTCAGCCGTTATCCGTACACATGACAAGGAAAAATG
GGCGGCTTCGTACAAAATCCGGTCTCTTGAAGAAAAGAGACTCATTGAACAGCTTGAACCGGGGATGCGCTGCACGTTTA
CAGGCTCTCTGGAACAGCCTGCACATGCGACGATTCCCGGGGGTTTTGATTATAAGGAATATCTTTACTCTCAGCAGATT
CACTGGTTATTTACCGTGACTTCTATTCAGCAGTGTGAAAAATCCAAACAGCCGCTGTTTAAACTGCTGAGCATCAGAAA
AAATTTGATTTCGATCATTCGGAATCACGTGCCTGAATCTTCCGCCGGAATTGTTGAAGCGCTGACCTTAGGTGAAAGAT
TTTCTATAGAAGACGATATACTGAGTGCATATCAAAATTTGGGAGTCGTTCATTTAATGGCGATTTCCGGAATGCATGTC
GGTCTTATTACGGCAGGACTATTTTATGCTCTGATCAGAATCGGGCTGACTAGAGAAAAGGCGGGGATGTTGCTGCTGCT
GTTTTTGCCGGTCTATACGCTGCTGAGCGGTGCCGCCCCATCCGTATTGCGCGCATCCCTCATGCTGGGATTTTATATCG
CCGGAACTCTTGTTAAACGCGGCATTCATTCCTCTGCTGCATTGTCTCTGTCTTATCTGCTGCTCCTGCTGTTTAATCCT
TACCTCCTTTGGCAGGCGGGCTTCCAGCTTTCCTTTGCGGTAAGCGCCTCTTTAATTCTGTCATCCTCCATTTTAAAGAA
AGCAGGGAAAAGCAGACTTGCCGGGCTTGCGATGGCTTCATTCATTGCAGAGCTCAGCTCACTTCCGTTTCTTCTCTATC
ATTTTCAGCAAATTTCACTTGCCAGTTTTCCGATGAATATGGTGATGGTGCCATTTTATACGTTATTTGTCATTCCGGTT
TCTGTCATCGGTTTCCTTCTTCTTTTACTTTCAAGGCAGATGGGAGAATGTTTGTTTAATATGTTTGACCTTGTGATGAA
GCCTGTGCATGATTTCATTACATATGCGGCATCCGTTGATTTATTTACTGTGATTGTGTTAAAGCCTGACTTTCTTTCCC
TTCTTCTGCTTGCTGTTTCCATTTTTACGCTTTTTGCGGCTTTAGAAAAGGGAGGTTTTTTAAAACTCAGGAAATCGGCT
CTTTTTTTCTGCGCGGTTTTGGCTTATTTAATATGCCGTCCGTATTTCAGTCCATGGGGAGAAGCGGATATGCTTGATAT
CGGGCAGGGAGACTCGCTGTTTATAAGCGCGCCTCACCGCAAAGGGACCGTAATGGTTGATACAGGGGGAGTGATTGCTT
ATCCCGGAGAATCATGGAAAGAAAAACGCCACCCGTATTCTATCGGCGAGAAGGTTTTGATTCCGTTTTTAAACGGAAAA
GGGGTGAAAAAGCTGGATGCGCTGATTTTAACCCATGCGGATCAGGATCACATCGGGGAAGCCGGAGTGTTAATCAAAAA
TCATAGAGTCAAACGGTTAATTGTCCCCGTGGGATTCGTAAAAGAACCGAAGGATCAGAACATATTAAATATGGCGAAAG
AAAACAACATTCCCGTTGCCGAAGCAAAGCGGGGCGACACCATTACAGCCGGTGATCTTCAGTTTCAGGTGCTGTCTCCG
GAGTCGTCTGACGGAAAGAGTAAAAATGATTCGTCACTGGTGCTTTGGACGGTTTTAGGCGGAGTGAGCTGGCTTTTGAC
GGGAGATTTAGAATCGGACGGCGAAACAGAAGTGCTGAAAACGTATCCGAAACTGAAGGCTGATATATTGAAGGCGGGTC
ATCACGGCAGCAAAAGCTCAACGGGTGAAGCCTTTTTGAAACAGCTTCAGCCGGAAGCAGCGCTGATTTCAGCAGGAAAA
GAGAATCGATACCATCATCCGCACGAAGAAGTGCTGGATCGTTTGAAGGCGTACTCTGTCAATGTGCTTCGCACCGATAT
CAGCGGAACGATTCAATACAGATTTGAAAAAGGCGCCGGAACGTTTTCCGTCTTCCCTCCATATGATATAGAAGAAACCA
GGGCGCAAGAAGTAAAAAAGACTGCCGATTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (208-469)

• Domain of unknown function (DUF4131) (DUF4131) (25-171)

• Metallo-beta-lactamase superfamily (Lactamase_B) (508-719)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC	Bacillus subtilis subsp. subtilis str. 168	56.736	98.595	0.559