Detailed information
Bioinformatically predicted
Overview
| Name | med | Type | Regulator |
| Locus tag | C5Y82_RS05420 | Genome accession | NZ_CP027034 |
| Coordinates | 1109683..1110645 (+) | Length | 320 a.a. |
| NCBI ID | WP_119124686.1 | Uniprot ID | - |
| Organism | Bacillus pumilus strain 150a | ||
| Function | regulation of regulators (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1104683..1115645
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C5Y82_RS05390 (C5Y82_05390) | argF | 1105011..1105961 (+) | 951 | WP_119124682.1 | ornithine carbamoyltransferase | - |
| C5Y82_RS05395 (C5Y82_05395) | - | 1106064..1106243 (+) | 180 | WP_003211282.1 | YjzC family protein | - |
| C5Y82_RS05400 (C5Y82_05400) | - | 1106414..1107679 (+) | 1266 | WP_119124683.1 | MFS transporter | - |
| C5Y82_RS05405 (C5Y82_05405) | - | 1107795..1107989 (-) | 195 | WP_003211779.1 | YjzD family protein | - |
| C5Y82_RS05410 (C5Y82_05410) | - | 1108201..1108941 (+) | 741 | WP_119124684.1 | hypothetical protein | - |
| C5Y82_RS05415 (C5Y82_05415) | - | 1109017..1109592 (+) | 576 | WP_119124685.1 | nad binding enzyme | - |
| C5Y82_RS05420 (C5Y82_05420) | med | 1109683..1110645 (+) | 963 | WP_119124686.1 | BMP family ABC transporter substrate-binding protein | Regulator |
| C5Y82_RS05425 (C5Y82_05425) | comZ | 1110656..1110853 (+) | 198 | WP_003211983.1 | ComZ family protein | Regulator |
| C5Y82_RS05430 (C5Y82_05430) | - | 1110864..1111097 (-) | 234 | WP_012009551.1 | hypothetical protein | - |
| C5Y82_RS05435 (C5Y82_05435) | - | 1111267..1112205 (+) | 939 | WP_012009552.1 | beta-ketoacyl-ACP synthase III | - |
| C5Y82_RS05440 (C5Y82_05440) | fabF | 1112227..1113468 (+) | 1242 | WP_012009553.1 | beta-ketoacyl-ACP synthase II | - |
| C5Y82_RS05445 (C5Y82_05445) | - | 1113546..1114349 (+) | 804 | WP_119124687.1 | DUF2268 domain-containing protein | - |
| C5Y82_RS05450 (C5Y82_05450) | - | 1114511..1115491 (+) | 981 | WP_119124688.1 | ABC transporter ATP-binding protein | - |
Sequence
Protein
Download Length: 320 a.a. Molecular weight: 35695.63 Da Isoelectric Point: 5.2654
>NTDB_id=274633 C5Y82_RS05420 WP_119124686.1 1109683..1110645(+) (med) [Bacillus pumilus strain 150a]
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGSEYSEIFNLISEDYPKTQFITVNGNKPQADNVVNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADSLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFLKDIESDIATYKKTGKLPNEK
MKYQRLVMIFSFLLLLSACSQAPLKGQIEKVGLLVPDTINDQVWGTKGYKGLLNIQSTFGVDVYYKEGMVDKEKIVDAIE
EFHKKGVNLIIGHGSEYSEIFNLISEDYPKTQFITVNGNKPQADNVVNVTFKGEAMGFFGGMTAAHMSKTKKIGILATYD
WQSEVDGFIKGAKYQDEHVQVLAEFVENWDDADKAVELYQKLKKQGVDVVYPAGDGYNIPVIEQIKADSLSAIGYVTDQS
NLGSHTVLTSTVQHVDKAYSIIAKKFNEGKLNEQGEYSFDFKEGVIEMGKFSSTIDRAFLKDIESDIATYKKTGKLPNEK
Nucleotide
Download Length: 963 bp
>NTDB_id=274633 C5Y82_RS05420 WP_119124686.1 1109683..1110645(+) (med) [Bacillus pumilus strain 150a]
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCGACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAGTGAATACAGCGAAATTTTCAACTTAATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTTGTGAATGTGACATTTAAAGGTG
AAGCGATGGGCTTTTTTGGAGGCATGACAGCAGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGACGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCGGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAACAGGGCGTAGATGTTGTATATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAGTTTATCAGCGATCGGATATGTCACCGATCAATCC
AACCTCGGTAGCCATACCGTCTTAACAAGCACTGTTCAGCATGTGGATAAAGCGTACAGTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAATGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTTTGAAAGACATTGAAAGTGATATTGCGACTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA
ATGAAGTATCAGCGGCTTGTCATGATCTTTTCGTTCCTTCTCCTATTATCTGCCTGCTCACAGGCACCTTTAAAAGGACA
GATTGAGAAGGTGGGTTTACTCGTCCCCGATACAATTAATGATCAAGTTTGGGGAACGAAAGGTTATAAAGGCTTATTAA
ATATTCAATCGACATTTGGTGTAGATGTTTATTATAAGGAAGGAATGGTCGACAAAGAGAAAATCGTTGATGCCATTGAA
GAATTTCACAAAAAAGGAGTCAATTTGATTATTGGCCATGGCAGTGAATACAGCGAAATTTTCAACTTAATTAGTGAAGA
TTATCCGAAAACACAATTTATCACGGTAAATGGAAACAAGCCTCAGGCGGATAATGTTGTGAATGTGACATTTAAAGGTG
AAGCGATGGGCTTTTTTGGAGGCATGACAGCAGCACATATGTCAAAAACAAAAAAGATTGGTATTCTTGCTACATATGAT
TGGCAAAGCGAAGTAGACGGCTTTATCAAAGGTGCAAAATATCAAGATGAACATGTACAAGTGCTTGCCGAGTTTGTCGA
AAACTGGGATGATGCGGACAAAGCCGTGGAGCTCTATCAAAAATTGAAAAAACAGGGCGTAGATGTTGTATATCCAGCAG
GTGATGGTTATAATATCCCTGTCATTGAACAAATCAAAGCCGATAGTTTATCAGCGATCGGATATGTCACCGATCAATCC
AACCTCGGTAGCCATACCGTCTTAACAAGCACTGTTCAGCATGTGGATAAAGCGTACAGTATTATTGCGAAGAAATTTAA
TGAAGGCAAGCTAAATGAACAAGGTGAGTACTCCTTTGACTTTAAAGAAGGAGTGATCGAAATGGGGAAATTTAGTTCCA
CCATTGACCGTGCTTTTTTGAAAGACATTGAAAGTGATATTGCGACTTACAAAAAAACTGGCAAACTGCCAAATGAAAAG
TGA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| med | Bacillus subtilis subsp. subtilis str. 168 |
64.856 |
97.813 |
0.634 |