Detailed information    

insolico Bioinformatically predicted

Overview


Name   luxP   Type   Regulator
Locus tag   FORC77_RS20745 Genome accession   NZ_CP027031
Coordinates   1170339..1171439 (-) Length   366 a.a.
NCBI ID   WP_131070399.1    Uniprot ID   -
Organism   Vibrio vulnificus strain FORC_077     
Function   autoinducer sensor (predicted from homology)   
Competence regulation

Genomic Context


Location: 1165339..1176439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FORC77_RS20725 (FORC77_3911) - 1165402..1165863 (-) 462 WP_011081676.1 Lrp/AsnC family transcriptional regulator -
  FORC77_RS20730 (FORC77_3912) - 1166011..1166985 (+) 975 WP_118894352.1 DMT family transporter -
  FORC77_RS20735 (FORC77_3913) - 1167113..1167772 (+) 660 WP_011152472.1 PilZ domain-containing protein -
  FORC77_RS20740 (FORC77_3914) luxQ 1167769..1170342 (-) 2574 WP_045595913.1 quorum-sensing autoinducer 2 sensor kinase/phosphatase LuxQ -
  FORC77_RS20745 (FORC77_3915) luxP 1170339..1171439 (-) 1101 WP_131070399.1 autoinducer 2-binding periplasmic protein LuxP Regulator
  FORC77_RS20750 (FORC77_3916) traF 1171626..1172801 (-) 1176 WP_015728163.1 conjugal transfer protein TraF -
  FORC77_RS20755 - 1172878..1173174 (-) 297 WP_011081682.1 GIY-YIG nuclease family protein -
  FORC77_RS20760 (FORC77_3918) - 1173174..1173836 (-) 663 WP_011081683.1 YceH family protein -
  FORC77_RS20765 (FORC77_3919) - 1173902..1174111 (-) 210 WP_011081684.1 hypothetical protein -
  FORC77_RS20770 (FORC77_3920) - 1174381..1174695 (+) 315 WP_011081685.1 DUF496 family protein -
  FORC77_RS20775 (FORC77_3921) - 1174867..1176195 (+) 1329 WP_131070400.1 MATE family efflux transporter -

Sequence


Protein


Download         Length: 366 a.a.        Molecular weight: 41270.79 Da        Isoelectric Point: 6.7735

>NTDB_id=274615 FORC77_RS20745 WP_131070399.1 1170339..1171439(-) (luxP) [Vibrio vulnificus strain FORC_077]
MKKILLTCLLASASFQVSSHTSEVLSGYWAYQEFLEKFPQQGVLTRELSEVVRNAPVPLKSHQSKPIRISVVFPGQQISD
YWVRNLSAFEKRMDKLHISYQINQVFTRPNADVKQQSVSLMEALKSKSDYLIFTLDTTRHRKFIEHVLDSSETKLILQNI
TTPVQAWDKRQPFLYVGFDHAEGSIALADKFKQLYPQGANYSVLYFSEGYVSDARGDTFIHQMNHSDRFALKSSFYTKAT
KASGYESAKNSLERYPDVDFIYACSTDVALGAIDALKALGRTNIKINGWGGGSAELDAIAAGDLDLTVMRMNDDTGIAMA
EAIKWDIEGRTVPTVFSGDFEVVTKEDSPEHIELLKKRAFRYSDQP

Nucleotide


Download         Length: 1101 bp        

>NTDB_id=274615 FORC77_RS20745 WP_131070399.1 1170339..1171439(-) (luxP) [Vibrio vulnificus strain FORC_077]
ATGAAAAAGATATTACTAACTTGTTTATTAGCGTCAGCAAGTTTTCAAGTAAGCTCACATACGTCAGAAGTCCTCAGTGG
GTACTGGGCTTATCAAGAATTTTTGGAAAAATTTCCTCAACAAGGCGTGCTCACACGAGAACTGTCTGAGGTGGTCAGGA
ATGCGCCTGTACCTTTAAAGAGTCATCAATCCAAACCGATTCGAATTTCAGTGGTATTTCCTGGTCAGCAGATCTCCGAT
TACTGGGTCAGAAATCTTTCCGCGTTTGAAAAACGCATGGATAAGCTGCATATCAGTTACCAAATCAATCAGGTTTTCAC
GCGGCCAAATGCCGATGTTAAACAGCAAAGCGTCTCCTTGATGGAAGCGTTGAAGAGTAAATCGGATTACCTCATTTTTA
CGCTCGACACGACGCGTCACCGCAAGTTCATTGAGCATGTATTAGACTCTTCCGAAACCAAGCTGATTCTGCAAAATATC
ACCACACCGGTTCAAGCTTGGGATAAAAGACAGCCATTTCTCTACGTCGGTTTTGACCATGCGGAAGGGAGCATTGCGCT
GGCCGATAAGTTCAAACAGCTTTACCCACAAGGTGCAAACTACTCAGTTCTTTACTTTTCTGAAGGTTACGTGAGTGATG
CTCGTGGTGACACCTTTATACATCAGATGAATCACAGTGATCGATTTGCACTAAAAAGCTCTTTTTACACCAAAGCGACC
AAAGCCTCAGGCTATGAGTCCGCAAAAAACAGTTTAGAGCGCTATCCTGATGTGGATTTTATCTACGCCTGTTCTACCGA
TGTGGCCCTGGGTGCCATTGATGCATTGAAAGCGTTGGGTCGCACAAACATCAAGATCAATGGATGGGGTGGTGGCTCTG
CTGAGCTTGACGCGATCGCGGCAGGTGACCTTGATTTGACGGTTATGCGCATGAACGATGATACGGGAATCGCTATGGCT
GAGGCGATCAAATGGGACATTGAAGGAAGAACTGTCCCGACCGTCTTTTCTGGCGACTTTGAAGTAGTGACAAAAGAAGA
CTCGCCAGAACACATCGAACTATTGAAAAAACGCGCGTTTAGATATTCAGATCAGCCATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  luxP Vibrio cholerae strain A1552

63.836

99.727

0.637


Multiple sequence alignment