Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | RK61_RS07100 | Genome accession | NZ_CP026964 |
| Coordinates | 1405191..1405586 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932692.1 | Uniprot ID | A0A641A2P1 |
| Organism | Staphylococcus aureus strain FDAARGOS_2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1400191..1410586
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK61_RS07070 (RK61_07070) | - | 1401450..1401854 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| RK61_RS07075 (RK61_07075) | - | 1402192..1402284 (+) | 93 | WP_031864518.1 | hypothetical protein | - |
| RK61_RS07080 (RK61_07080) | - | 1402416..1402649 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| RK61_RS07085 (RK61_07085) | murA | 1402760..1404025 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| RK61_RS07090 (RK61_07090) | fabZ | 1404059..1404499 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| RK61_RS07095 (RK61_07095) | - | 1404557..1404997 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| RK61_RS07100 (RK61_07100) | ssb | 1405191..1405586 (+) | 396 | WP_000932692.1 | single-stranded DNA-binding protein | Machinery gene |
| RK61_RS07105 (RK61_07105) | sceD | 1405975..1406670 (+) | 696 | WP_000752008.1 | lytic transglycosylase SceD | - |
| RK61_RS07115 (RK61_07115) | tenA | 1407194..1407883 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| RK61_RS07120 (RK61_07120) | thiD | 1407876..1408706 (+) | 831 | WP_000594960.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RK61_RS07125 (RK61_07125) | thiM | 1408690..1409490 (+) | 801 | WP_001108492.1 | hydroxyethylthiazole kinase | - |
| RK61_RS07130 (RK61_07130) | thiE | 1409483..1410124 (+) | 642 | WP_000483155.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15114.16 Da Isoelectric Point: 5.2452
>NTDB_id=274003 RK61_RS07100 WP_000932692.1 1405191..1405586(+) (ssb) [Staphylococcus aureus strain FDAARGOS_2]
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVERLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=274003 RK61_RS07100 WP_000932692.1 1405191..1405586(+) (ssb) [Staphylococcus aureus strain FDAARGOS_2]
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGAGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus MW2 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus N315 |
99.237 |
100 |
0.992 |