Detailed information    

insolico Bioinformatically predicted

Overview


Name   letA   Type   Regulator
Locus tag   A320_RS01400 Genome accession   NZ_CP032055
Coordinates   292977..293612 (-) Length   211 a.a.
NCBI ID   WP_000633799.1    Uniprot ID   A0AA36K8B3
Organism   Acinetobacter baumannii strain A320 (RUH134)     
Function   regulate competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 287977..298612
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  A320_RS01385 (A320_00275) - 288764..289948 (+) 1185 WP_000942504.1 S41 family peptidase -
  A320_RS01390 (A320_00276) - 289952..291373 (-) 1422 WP_000840549.1 sigma-54 dependent transcriptional regulator -
  A320_RS01395 (A320_00277) pilS 291398..292966 (-) 1569 WP_001160333.1 PAS domain-containing sensor histidine kinase Regulator
  A320_RS01400 (A320_00278) letA 292977..293612 (-) 636 WP_000633799.1 response regulator Regulator
  A320_RS01405 (A320_00279) pbpG 293825..294871 (+) 1047 WP_003384760.1 D-alanyl-D-alanine endopeptidase PBP7/8 -
  A320_RS01410 (A320_00280) thrC 294978..296117 (-) 1140 WP_000063593.1 threonine synthase -
  A320_RS01415 (A320_00281) - 296173..297474 (-) 1302 WP_000805827.1 homoserine dehydrogenase -
  A320_RS01420 (A320_00282) - 297719..298534 (-) 816 WP_000011159.1 DsbC family protein -

Sequence


Protein


Download         Length: 211 a.a.        Molecular weight: 23147.79 Da        Isoelectric Point: 5.0959

>NTDB_id=273977 A320_RS01400 WP_000633799.1 292977..293612(-) (letA) [Acinetobacter baumannii strain A320 (RUH134)]
MITVLVVDDHELVRTGICRMLEDHADVEVIGQAESGEEAIAIVRQQHPQVVLLDVNMPGIGGVETTRRLLQTAPETKVIA
VSGLAEEPYPSLLLKAGAKGYITKGAPIAEMVRAINKVMQGGKYFSADIAEQLASSYLSDTQQSPFDSLSEREMQVAMMV
VNCISAQEIADKLFVSVKTVNTYRYRIFEKLGIDSDVKLTHLAIRYGLIKP

Nucleotide


Download         Length: 636 bp        

>NTDB_id=273977 A320_RS01400 WP_000633799.1 292977..293612(-) (letA) [Acinetobacter baumannii strain A320 (RUH134)]
TTGATTACAGTTTTAGTTGTCGATGACCATGAACTGGTACGTACGGGTATTTGCCGTATGTTAGAAGATCATGCCGATGT
TGAGGTAATTGGACAAGCCGAATCGGGCGAAGAAGCAATTGCTATCGTTCGCCAACAACATCCGCAAGTCGTACTGCTGG
ATGTCAACATGCCAGGCATCGGTGGTGTAGAAACAACCCGTCGTTTATTACAGACGGCTCCAGAGACGAAAGTCATTGCT
GTAAGCGGCCTCGCCGAAGAGCCTTACCCATCTTTATTATTAAAAGCCGGTGCAAAAGGCTATATCACTAAAGGCGCGCC
AATTGCCGAAATGGTTCGTGCAATTAATAAGGTCATGCAAGGCGGTAAATATTTTAGTGCAGATATTGCCGAACAACTCG
CGAGCTCATATTTATCCGACACTCAACAATCCCCTTTTGATTCGTTATCGGAACGGGAAATGCAAGTTGCAATGATGGTC
GTCAACTGTATTAGCGCCCAAGAAATTGCCGATAAACTTTTTGTAAGTGTGAAAACTGTAAATACTTACCGTTATCGTAT
TTTTGAAAAGTTAGGAATTGATAGCGATGTAAAACTAACACATCTTGCGATTCGTTACGGTTTGATCAAACCATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0AA36K8B3

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  letA Legionella pneumophila str. Paris

55.238

99.526

0.55

  letA Legionella pneumophila strain ERS1305867

55.238

99.526

0.55


Multiple sequence alignment