Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | RK98_RS09745 | Genome accession | NZ_CP026958 |
| Coordinates | 1854852..1855247 (+) | Length | 131 a.a. |
| NCBI ID | WP_000932694.1 | Uniprot ID | - |
| Organism | Staphylococcus aureus strain FDAARGOS_40 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1849852..1860247
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| RK98_RS09715 (RK98_09715) | - | 1851110..1851514 (+) | 405 | WP_001094394.1 | F0F1 ATP synthase subunit epsilon | - |
| RK98_RS09720 (RK98_09720) | - | 1851852..1851944 (+) | 93 | WP_001790611.1 | hypothetical protein | - |
| RK98_RS09725 (RK98_09725) | - | 1852076..1852309 (+) | 234 | WP_000384523.1 | DUF1146 family protein | - |
| RK98_RS09730 (RK98_09730) | murA | 1852420..1853685 (+) | 1266 | WP_000358006.1 | UDP-N-acetylglucosamine 1-carboxyvinyltransferase | - |
| RK98_RS09735 (RK98_09735) | fabZ | 1853719..1854159 (+) | 441 | WP_000447678.1 | 3-hydroxyacyl-ACP dehydratase FabZ | - |
| RK98_RS09740 (RK98_09740) | - | 1854218..1854658 (-) | 441 | WP_000846746.1 | YwpF-like family protein | - |
| RK98_RS09745 (RK98_09745) | ssb | 1854852..1855247 (+) | 396 | WP_000932694.1 | single-stranded DNA-binding protein | Machinery gene |
| RK98_RS09750 (RK98_09750) | sceD | 1855636..1856331 (+) | 696 | WP_000752005.1 | lytic transglycosylase SceD | - |
| RK98_RS09755 (RK98_09755) | tenA | 1856718..1857407 (+) | 690 | WP_000396077.1 | thiaminase II | - |
| RK98_RS09760 (RK98_09760) | thiD | 1857400..1858230 (+) | 831 | WP_000594954.1 | bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | - |
| RK98_RS09765 (RK98_09765) | thiM | 1858214..1859005 (+) | 792 | WP_001108483.1 | hydroxyethylthiazole kinase | - |
| RK98_RS09770 (RK98_09770) | thiE | 1859007..1859648 (+) | 642 | WP_000483153.1 | thiamine phosphate synthase | - |
Sequence
Protein
Download Length: 131 a.a. Molecular weight: 15042.09 Da Isoelectric Point: 5.6824
>NTDB_id=273843 RK98_RS09745 WP_000932694.1 1854852..1855247(+) (ssb) [Staphylococcus aureus strain FDAARGOS_40]
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
MLNKIVIVGRLTKDAQIFEKEDRKIATFCVATHRNYKDENGEIVCDYLFCKAFGKLASNIEKYTNQGTLVGITGQMRSRK
YDKDGQTHFVTELYVETIKFMSPKSQNNEILSDSILDIDSQNIDNHDLLEI
Nucleotide
Download Length: 396 bp
>NTDB_id=273843 RK98_RS09745 WP_000932694.1 1854852..1855247(+) (ssb) [Staphylococcus aureus strain FDAARGOS_40]
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
ATGCTAAATAAAATCGTAATTGTCGGGAGACTGACGAAAGACGCACAAATATTTGAAAAGGAGGATAGAAAAATTGCAAC
GTTTTGTGTTGCAACGCACCGAAATTATAAAGATGAAAATGGAGAAATCGTCTGTGATTACTTATTCTGTAAAGCATTTG
GCAAGTTAGCTTCTAATATAGAAAAATATACTAATCAAGGTACATTGGTTGGTATAACTGGTCAAATGAGATCAAGAAAG
TATGATAAAGACGGACAAACACACTTTGTCACTGAATTATATGTTGAAACAATAAAATTTATGTCCCCTAAATCCCAAAA
TAATGAAATTCTCTCAGATAGTATTTTAGATATTGACTCTCAAAATATAGATAATCATGACTTATTAGAAATTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Staphylococcus aureus N315 |
100 |
100 |
1 |
| ssb | Staphylococcus aureus MW2 |
99.237 |
100 |
0.992 |