Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   C5F70_RS26590 Genome accession   NZ_CP026880
Coordinates   5748307..5748714 (+) Length   135 a.a.
NCBI ID   WP_010564379.1    Uniprot ID   A0A7Y8D5M8
Organism   Pseudomonas sp. LH1G9     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 5743307..5753714
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C5F70_RS26560 - 5743307..5744311 (-) 1005 WP_017845002.1 aspartate carbamoyltransferase catalytic subunit -
  C5F70_RS26565 pyrR 5744336..5744842 (-) 507 WP_017845001.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  C5F70_RS26570 ruvX 5744927..5745364 (-) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  C5F70_RS26575 - 5745364..5745933 (-) 570 WP_104904300.1 YqgE/AlgH family protein -
  C5F70_RS26580 - 5746131..5747036 (-) 906 WP_017844999.1 energy transducer TonB -
  C5F70_RS26585 gshB 5747114..5748067 (-) 954 WP_017844998.1 glutathione synthase -
  C5F70_RS26590 pilG 5748307..5748714 (+) 408 WP_010564379.1 twitching motility response regulator PilG Regulator
  C5F70_RS26595 pilH 5748761..5749126 (+) 366 WP_046487806.1 twitching motility response regulator PilH -
  C5F70_RS26600 - 5749139..5749663 (+) 525 WP_046381763.1 chemotaxis protein CheW -
  C5F70_RS26605 - 5749660..5751711 (+) 2052 WP_017844995.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 135 a.a.        Molecular weight: 14906.40 Da        Isoelectric Point: 7.3842

>NTDB_id=273041 C5F70_RS26590 WP_010564379.1 5748307..5748714(+) (pilG) [Pseudomonas sp. LH1G9]
MEQHSNALRVMVIDDSKTIRRTAETLLKNVGCDVITAIDGFDALARIVDHHPHIIFVDIMMPRLDGYQTCALVKNNPAFK
SIPVIMLSSKDGLFDKAKGRIVGVDQFLTKPFSKEELLGAIKAYVPGFAAVEQAH

Nucleotide


Download         Length: 408 bp        

>NTDB_id=273041 C5F70_RS26590 WP_010564379.1 5748307..5748714(+) (pilG) [Pseudomonas sp. LH1G9]
ATGGAACAGCATTCCAACGCCTTGAGAGTGATGGTGATCGACGATTCGAAAACGATCCGCCGCACCGCCGAAACCCTGTT
GAAGAACGTGGGCTGCGATGTCATCACGGCCATCGATGGTTTCGATGCCCTGGCCCGGATTGTGGATCATCACCCGCACA
TTATCTTTGTCGACATCATGATGCCGCGCCTGGATGGCTATCAGACTTGCGCCCTGGTGAAGAACAACCCGGCGTTCAAG
TCGATCCCGGTGATCATGCTGTCTTCCAAGGACGGCCTGTTCGACAAGGCCAAGGGGCGTATCGTCGGTGTCGATCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGGGCGCGATCAAGGCCTACGTGCCGGGTTTCGCCGCAGTAGAACAAG
CACACTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A7Y8D5M8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

70.4

92.593

0.652
  vicR Streptococcus mutans UA159

38.889

93.333

0.363

Multiple sequence alignment