Detailed information
Bioinformatically predicted
Overview
| Name | pepF | Type | Regulator |
| Locus tag | C4597_RS06670 | Genome accession | NZ_CP026847 |
| Coordinates | 1344429..1346234 (+) | Length | 601 a.a. |
| NCBI ID | WP_006845241.1 | Uniprot ID | A0A7H1MN57 |
| Organism | Weissella koreensis strain WiKim0080 | ||
| Function | degradation of XIP; competence shut-off (predicted from homology) Competence regulation |
||
Genomic Context
Location: 1339429..1351234
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C4597_RS06645 (C4597_06645) | - | 1340095..1340937 (+) | 843 | WP_006845235.1 | YitT family protein | - |
| C4597_RS06650 (C4597_06650) | - | 1340986..1341735 (+) | 750 | WP_006845236.1 | DnaD domain protein | - |
| C4597_RS06655 (C4597_06655) | - | 1341755..1342258 (+) | 504 | WP_006845237.1 | MscL family protein | - |
| C4597_RS07700 | - | 1342304..1342447 (+) | 144 | WP_006845238.1 | hypothetical protein | - |
| C4597_RS06660 (C4597_06660) | - | 1342511..1343230 (+) | 720 | WP_006845239.1 | adaptor protein MecA | - |
| C4597_RS06665 (C4597_06665) | - | 1343351..1344409 (+) | 1059 | WP_341456506.1 | competence protein CoiA family protein | - |
| C4597_RS06670 (C4597_06670) | pepF | 1344429..1346234 (+) | 1806 | WP_006845241.1 | oligoendopeptidase F | Regulator |
| C4597_RS06675 (C4597_06675) | glyQ | 1346584..1347510 (+) | 927 | WP_006845243.1 | glycine--tRNA ligase subunit alpha | - |
| C4597_RS06680 (C4597_06680) | glyS | 1347512..1349584 (+) | 2073 | WP_104914670.1 | glycine--tRNA ligase subunit beta | - |
| C4597_RS06685 (C4597_06685) | - | 1349778..1350209 (+) | 432 | WP_006845245.1 | MarR family winged helix-turn-helix transcriptional regulator | - |
| C4597_RS06690 (C4597_06690) | - | 1350313..1350852 (+) | 540 | WP_006845246.1 | NADPH-dependent FMN reductase | - |
Sequence
Protein
Download Length: 601 a.a. Molecular weight: 68219.99 Da Isoelectric Point: 4.1831
>NTDB_id=272978 C4597_RS06670 WP_006845241.1 1344429..1346234(+) (pepF) [Weissella koreensis strain WiKim0080]
MVKEIPIRSEVPTSQTWDLTTIFKDDQAFDAAVEDLNLRLELSDALAEKVSNSGQDLYQALQYGLSLMRDLEKVYVYASM
KSDQDTGNQYYQGLNAIAGNLAAQVSSAIAFFDPAVLSLSDQQLAEMFETEPRLKDYQHYFETILTQKGHVLSRESEELL
AGASEVFNASQNTFSILDNADMEFGAVENEDGEFEQLTNGVYSRLLESSNPTVRKNAFQTFYQSYAQLENTFGTLISGNV
KQQNFQAQVRNYQSAREAALAQNHIPEVVYDNLVETTHQALPLLHRYVALRKKMLKLPELHSYDLYTPILGTPDFDIDYE
SAKAMALEALKPMGDEYLSIMNDAFDERWIDVVENKGKRSGAYSGGSYDTNPFMLLNWVDNLNNLYTLVHEMGHSVHSYQ
TRNNQPYQYGDYPIFLAEIASTTNENLLTDYLLKTITDPQIRAYILNQYLDGFKGTMFRQTQFAEFEQWMHEKDASGVPL
TAEVLDDAYLDLNQEYYGPALTVDPEIAYEWARIPHFYYNFYVFQYSTGFAAATALAEQILHGGTEGVAAYMSYLQAGSS
DFPLEVIKKAGVDMAKTDYLQATFDVFEQRLNEFESIIDTL
MVKEIPIRSEVPTSQTWDLTTIFKDDQAFDAAVEDLNLRLELSDALAEKVSNSGQDLYQALQYGLSLMRDLEKVYVYASM
KSDQDTGNQYYQGLNAIAGNLAAQVSSAIAFFDPAVLSLSDQQLAEMFETEPRLKDYQHYFETILTQKGHVLSRESEELL
AGASEVFNASQNTFSILDNADMEFGAVENEDGEFEQLTNGVYSRLLESSNPTVRKNAFQTFYQSYAQLENTFGTLISGNV
KQQNFQAQVRNYQSAREAALAQNHIPEVVYDNLVETTHQALPLLHRYVALRKKMLKLPELHSYDLYTPILGTPDFDIDYE
SAKAMALEALKPMGDEYLSIMNDAFDERWIDVVENKGKRSGAYSGGSYDTNPFMLLNWVDNLNNLYTLVHEMGHSVHSYQ
TRNNQPYQYGDYPIFLAEIASTTNENLLTDYLLKTITDPQIRAYILNQYLDGFKGTMFRQTQFAEFEQWMHEKDASGVPL
TAEVLDDAYLDLNQEYYGPALTVDPEIAYEWARIPHFYYNFYVFQYSTGFAAATALAEQILHGGTEGVAAYMSYLQAGSS
DFPLEVIKKAGVDMAKTDYLQATFDVFEQRLNEFESIIDTL
Nucleotide
Download Length: 1806 bp
>NTDB_id=272978 C4597_RS06670 WP_006845241.1 1344429..1346234(+) (pepF) [Weissella koreensis strain WiKim0080]
ATGGTAAAAGAAATTCCAATCCGTTCAGAAGTGCCTACAAGCCAAACTTGGGACTTAACAACGATTTTTAAAGATGATCA
AGCTTTTGACGCTGCTGTTGAAGATTTGAATCTACGACTTGAATTATCAGATGCTTTGGCTGAAAAGGTGTCTAATTCTG
GTCAAGATTTATATCAAGCTCTACAATATGGTTTAAGCTTGATGCGTGATTTAGAAAAAGTATATGTGTATGCATCAATG
AAGTCTGATCAAGATACTGGTAATCAATATTATCAAGGCTTAAATGCAATTGCTGGAAATTTAGCGGCACAAGTATCAAG
TGCAATTGCCTTCTTTGATCCAGCAGTATTAAGTCTTTCGGATCAACAATTAGCTGAAATGTTTGAGACTGAGCCTAGAT
TAAAGGACTATCAACATTATTTTGAAACGATTCTAACGCAAAAAGGGCATGTTCTATCACGGGAAAGCGAAGAACTTTTG
GCTGGGGCTTCTGAAGTCTTTAATGCTTCGCAAAATACATTTAGTATTTTAGATAATGCGGATATGGAATTTGGAGCAGT
TGAAAATGAAGATGGTGAATTCGAACAATTGACGAATGGTGTTTATAGCCGCTTGTTAGAGTCGTCTAATCCAACAGTCC
GTAAAAATGCTTTTCAAACTTTCTATCAATCTTATGCGCAATTAGAGAATACGTTTGGAACACTTATTAGTGGAAATGTT
AAACAACAAAATTTTCAAGCGCAAGTTCGAAACTATCAATCAGCTCGTGAAGCGGCCTTGGCACAAAATCATATTCCAGA
AGTTGTTTATGATAATTTGGTTGAAACTACACATCAAGCCTTACCTCTGTTACATCGTTATGTAGCACTTCGTAAAAAAA
TGTTGAAGTTACCTGAATTACATTCATATGATTTGTATACACCTATTTTAGGAACACCTGATTTTGATATCGACTATGAA
TCAGCTAAGGCGATGGCTTTGGAAGCTCTGAAGCCTATGGGTGATGAATATCTATCAATTATGAATGATGCCTTTGATGA
ACGTTGGATTGACGTTGTTGAAAATAAAGGGAAACGTAGTGGAGCATATTCGGGAGGATCGTATGATACCAATCCCTTCA
TGCTATTAAATTGGGTGGATAATTTAAATAATTTGTACACCCTGGTTCATGAAATGGGACATTCGGTTCATAGTTATCAA
ACTCGAAATAATCAGCCTTATCAATATGGAGATTACCCAATCTTTTTAGCTGAGATCGCTTCAACTACCAATGAGAATCT
ATTAACTGATTATTTGTTAAAGACAATTACGGATCCACAAATTCGAGCTTATATCTTGAATCAATACCTAGATGGATTCA
AGGGAACTATGTTTAGGCAAACTCAATTTGCTGAATTTGAGCAATGGATGCACGAAAAGGATGCAAGCGGGGTACCTTTA
ACGGCAGAAGTTCTTGATGATGCGTATCTGGATTTGAATCAAGAATATTATGGTCCAGCGTTGACCGTTGATCCAGAAAT
TGCATATGAGTGGGCTCGTATTCCACACTTCTATTACAATTTCTATGTATTTCAATATTCGACTGGCTTCGCTGCAGCGA
CGGCCTTAGCAGAGCAAATTTTGCATGGAGGAACTGAAGGAGTGGCTGCTTATATGAGCTATCTACAAGCTGGTTCATCA
GATTTTCCATTGGAAGTTATTAAAAAAGCTGGCGTTGATATGGCTAAAACGGATTATTTACAAGCAACCTTTGACGTCTT
TGAACAACGTCTAAATGAATTTGAATCTATTATTGATACGCTTTAA
ATGGTAAAAGAAATTCCAATCCGTTCAGAAGTGCCTACAAGCCAAACTTGGGACTTAACAACGATTTTTAAAGATGATCA
AGCTTTTGACGCTGCTGTTGAAGATTTGAATCTACGACTTGAATTATCAGATGCTTTGGCTGAAAAGGTGTCTAATTCTG
GTCAAGATTTATATCAAGCTCTACAATATGGTTTAAGCTTGATGCGTGATTTAGAAAAAGTATATGTGTATGCATCAATG
AAGTCTGATCAAGATACTGGTAATCAATATTATCAAGGCTTAAATGCAATTGCTGGAAATTTAGCGGCACAAGTATCAAG
TGCAATTGCCTTCTTTGATCCAGCAGTATTAAGTCTTTCGGATCAACAATTAGCTGAAATGTTTGAGACTGAGCCTAGAT
TAAAGGACTATCAACATTATTTTGAAACGATTCTAACGCAAAAAGGGCATGTTCTATCACGGGAAAGCGAAGAACTTTTG
GCTGGGGCTTCTGAAGTCTTTAATGCTTCGCAAAATACATTTAGTATTTTAGATAATGCGGATATGGAATTTGGAGCAGT
TGAAAATGAAGATGGTGAATTCGAACAATTGACGAATGGTGTTTATAGCCGCTTGTTAGAGTCGTCTAATCCAACAGTCC
GTAAAAATGCTTTTCAAACTTTCTATCAATCTTATGCGCAATTAGAGAATACGTTTGGAACACTTATTAGTGGAAATGTT
AAACAACAAAATTTTCAAGCGCAAGTTCGAAACTATCAATCAGCTCGTGAAGCGGCCTTGGCACAAAATCATATTCCAGA
AGTTGTTTATGATAATTTGGTTGAAACTACACATCAAGCCTTACCTCTGTTACATCGTTATGTAGCACTTCGTAAAAAAA
TGTTGAAGTTACCTGAATTACATTCATATGATTTGTATACACCTATTTTAGGAACACCTGATTTTGATATCGACTATGAA
TCAGCTAAGGCGATGGCTTTGGAAGCTCTGAAGCCTATGGGTGATGAATATCTATCAATTATGAATGATGCCTTTGATGA
ACGTTGGATTGACGTTGTTGAAAATAAAGGGAAACGTAGTGGAGCATATTCGGGAGGATCGTATGATACCAATCCCTTCA
TGCTATTAAATTGGGTGGATAATTTAAATAATTTGTACACCCTGGTTCATGAAATGGGACATTCGGTTCATAGTTATCAA
ACTCGAAATAATCAGCCTTATCAATATGGAGATTACCCAATCTTTTTAGCTGAGATCGCTTCAACTACCAATGAGAATCT
ATTAACTGATTATTTGTTAAAGACAATTACGGATCCACAAATTCGAGCTTATATCTTGAATCAATACCTAGATGGATTCA
AGGGAACTATGTTTAGGCAAACTCAATTTGCTGAATTTGAGCAATGGATGCACGAAAAGGATGCAAGCGGGGTACCTTTA
ACGGCAGAAGTTCTTGATGATGCGTATCTGGATTTGAATCAAGAATATTATGGTCCAGCGTTGACCGTTGATCCAGAAAT
TGCATATGAGTGGGCTCGTATTCCACACTTCTATTACAATTTCTATGTATTTCAATATTCGACTGGCTTCGCTGCAGCGA
CGGCCTTAGCAGAGCAAATTTTGCATGGAGGAACTGAAGGAGTGGCTGCTTATATGAGCTATCTACAAGCTGGTTCATCA
GATTTTCCATTGGAAGTTATTAAAAAAGCTGGCGTTGATATGGCTAAAACGGATTATTTACAAGCAACCTTTGACGTCTT
TGAACAACGTCTAAATGAATTTGAATCTATTATTGATACGCTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pepF | Streptococcus salivarius strain HSISS4 |
54.899 |
98.502 |
0.541 |