Detailed information NTG0027254

Bioinformatically predicted

Overview

• Name: comE
• Type: Machinery gene
• Locus tag: NMC_RS09895
• Genome accession: NC_008767
• Coordinates: 1907066..1907530 (-)
• Length: 154 a.a.
• NCBI ID: WP_011798959.1
• Uniprot ID: -
• Organism: Neisseria meningitidis FAM18
• Function: DNA binding (predicted from homology) DNA binding and uptake

Genomic Context

Location: 1902066..1912530

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMC_RS09850 (NMC1870)	-	1902080..1902325 (-)	246	WP_002226028.1	hypothetical protein	-
NMC_RS09860 (NMC1871)	-	1902437..1902865 (+)	429	WP_002226027.1	CopD family protein	-
NMC_RS09865 (NMC1872)	-	1902877..1903353 (+)	477	WP_041423261.1	CYTH domain-containing protein	-
NMC_RS09870 (NMC1873)	-	1903703..1904191 (-)	489	WP_002235430.1	dihydrofolate reductase	-
NMC_RS09875 (NMC1874)	aroG	1904259..1905314 (-)	1056	WP_002235429.1	3-deoxy-7-phosphoheptulonate synthase AroG	-
NMC_RS14045	-	1905476..1905703 (-)	228	WP_153310284.1	hypothetical protein	-
NMC_RS09885 (NMC1877)	-	1905981..1906238 (+)	258	WP_002231679.1	membrane protein	-
NMC_RS14515	-	1906287..1906391 (-)	105	Protein_1834	IS1595 family transposase	-
NMC_RS09895 (NMC1880)	comE	1907066..1907530 (-)	465	WP_011798959.1	ComEA family DNA-binding protein	Machinery gene

Sequence

Protein

• Length: 154 a.a.
• Molecular weight: 16563.76 Da
• Isoelectric Point: 10.8773

>NTDB_id=27254 NMC_RS09895 WP_011798959.1 1907066..1907530(-) (comE) [Neisseria meningitidis FAM18]
MLYPEKMSGMAGRHPYGVRSGLRRNGLKLWDIHFRMTRFIVARCGLLFATLKGKTMKKMFVLFCMLFSCAFSLAAVNINA
ASQQELEALPGIGPAKAKAIAEYRAQNGAFKSVDDLTKVKGIGPAVLAKLKDQASVGAPAPKGPAKPALPADKK

Nucleotide

• Length: 465 bp

>NTDB_id=27254 NMC_RS09895 WP_011798959.1 1907066..1907530(-) (comE) [Neisseria meningitidis FAM18]
TTGCTTTACCCGGAAAAAATGTCGGGGATGGCGGGACGGCATCCGTACGGCGTCCGGTCGGGTTTGCGGAGGAACGGCTT
GAAACTTTGGGATATTCATTTTAGAATGACCCGTTTTATCGTCGCAAGATGCGGTTTATTGTTTGCAACCCTTAAAGGAA
AAACCATGAAGAAAATGTTCGTGCTGTTCTGTATGCTGTTCTCCTGCGCCTTCTCCCTTGCGGCGGTAAACATCAATGCG
GCTTCGCAGCAGGAGTTGGAGGCGCTGCCGGGCATAGGCCCTGCGAAGGCGAAGGCCATTGCGGAATACCGTGCGCAAAA
CGGTGCGTTCAAGTCTGTGGACGATTTGACCAAGGTAAAGGGCATCGGCCCTGCGGTGCTGGCGAAGCTGAAGGATCAGG
CTTCTGTCGGCGCGCCCGCACCAAAAGGCCCGGCAAAACCGGCTCTGCCCGCGGATAAAAAATAG

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (75-133)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comE	Neisseria gonorrhoeae MS11	93.443	79.221	0.74
comE	Neisseria gonorrhoeae MS11	93.443	79.221	0.74
comE	Neisseria gonorrhoeae MS11	93.443	79.221	0.74
comE	Neisseria gonorrhoeae MS11	93.443	79.221	0.74