Detailed information    

insolico Bioinformatically predicted

Overview

Name   dsbA1   Type   Machinery gene
Locus tag   NMC_RS01480 Genome accession   NC_008767
Coordinates   273004..273702 (+) Length   232 a.a.
NCBI ID   WP_002221583.1    Uniprot ID   A1KRV7
Organism   Neisseria meningitidis FAM18     
Function   DNA binding and uptake; interact with PilQ (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 268004..278702
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMC_RS01465 (NMC0270) trpC 269085..269867 (-) 783 WP_002221587.1 indole-3-glycerol phosphate synthase TrpC -
  NMC_RS01470 (NMC0271) - 269918..270874 (-) 957 WP_002221585.1 YheT family hydrolase -
  NMC_RS01475 (NMC0272) murJ 271007..272545 (-) 1539 WP_002221584.1 murein biosynthesis integral membrane protein MurJ -
  NMC_RS01480 (NMC0273) dsbA1 273004..273702 (+) 699 WP_002221583.1 thiol:disulfide interchange protein DsbA/DsbL Machinery gene
  NMC_RS01485 (NMC0274) amgK 273759..274763 (-) 1005 WP_002221582.1 N-acetylmuramate/N-acetylglucosamine kinase AmgK -
  NMC_RS01490 (NMC0275) - 274833..277241 (+) 2409 WP_002247753.1 LPS-assembly protein LptD -
  NMC_RS01495 (NMC0276) - 277346..278560 (+) 1215 WP_041423242.1 peptidylprolyl isomerase -

Sequence

Protein


Download         Length: 232 a.a.        Molecular weight: 25236.83 Da        Isoelectric Point: 5.3490

>NTDB_id=27221 NMC_RS01480 WP_002221583.1 273004..273702(+) (dsbA1) [Neisseria meningitidis FAM18]
MKSKHLALGVAALFALAACDSKVQTSVPADSAPAASAAAAPAGLVEGQNYTVLANPIPQQQAGKVEVLEFFGYFCPHCAH
LEPVLSKHAKSFKDDMYLRTEHVVWQKEMLTLARLAAAVDMAAADSKDVANSHIFDAMVNQKIKLQEPEVLKKWLGEQTA
FDGKKVLAAYESPESQARADKMQELTETFQIDGTPTVIVGGKYKVEFADWESGMNTIDLLADKVREEQKAAQ

Nucleotide


Download         Length: 699 bp        

>NTDB_id=27221 NMC_RS01480 WP_002221583.1 273004..273702(+) (dsbA1) [Neisseria meningitidis FAM18]
ATGAAATCCAAACACCTCGCCCTCGGCGTTGCCGCCCTGTTCGCACTTGCCGCGTGCGACAGCAAAGTCCAAACCAGCGT
CCCCGCCGACAGCGCGCCTGCCGCTTCGGCAGCCGCCGCCCCGGCAGGGCTGGTCGAAGGGCAAAACTATACTGTCCTTG
CCAACCCGATTCCCCAACAGCAGGCAGGCAAAGTCGAAGTCCTTGAGTTTTTCGGCTATTTCTGTCCGCACTGCGCCCAC
CTCGAACCTGTTTTAAGCAAACACGCCAAGTCTTTTAAAGACGATATGTACCTGCGTACCGAACACGTCGTCTGGCAGAA
AGAAATGCTGACGCTCGCACGCCTCGCCGCCGCCGTCGATATGGCTGCCGCCGACAGCAAAGATGTGGCGAACAGCCATA
TTTTCGATGCGATGGTCAACCAAAAAATCAAGCTGCAAGAGCCGGAAGTCCTCAAAAAATGGCTGGGCGAACAAACCGCC
TTTGACGGCAAAAAAGTCCTTGCCGCTTACGAATCTCCCGAAAGCCAGGCGCGCGCCGACAAAATGCAGGAGCTGACCGA
AACCTTTCAAATCGACGGTACGCCCACGGTTATCGTCGGCGGCAAATATAAAGTCGAATTTGCCGACTGGGAGTCCGGTA
TGAACACCATCGACCTTTTGGCGGACAAAGTACGCGAAGAACAAAAAGCCGCGCAGTAA

Domains

Predicted by InterproScan.

Thioredoxin (Thioredoxin_4)

(63-212)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A1KRV7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dsbA1 Neisseria meningitidis MC58

99.138

100

0.991
  dsbA2 Neisseria meningitidis MC58

76.19

81.466

0.621

Multiple sequence alignment