Detailed information NTG0271845

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: AM435_RS04355
• Genome accession: NZ_CP026707
• Coordinates: 648318..649019 (-)
• Length: 233 a.a.
• NCBI ID: WP_000594589.1
• Uniprot ID: A0A9P3CZ31
• Organism: Acinetobacter baumannii strain AR_0056
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 643318..654019

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
AM435_RS04325 (AM435_04325)	-	643624..644067 (-)	444	WP_001246675.1	SRPBCC family protein	-
AM435_RS04330 (AM435_04330)	tadA	644137..644640 (-)	504	WP_000033178.1	tRNA adenosine(34) deaminase TadA	-
AM435_RS04335 (AM435_04335)	-	644647..645771 (-)	1125	WP_001983908.1	enoyl-CoA hydratase/isomerase family protein	-
AM435_RS04340 (AM435_04340)	ung	645768..646481 (-)	714	WP_001177528.1	uracil-DNA glycosylase	-
AM435_RS04345 (AM435_04345)	-	646532..647128 (-)	597	WP_000908452.1	6-pyruvoyl trahydropterin synthase family protein	-
AM435_RS04350 (AM435_04350)	gspK	647359..648318 (-)	960	WP_000301476.1	type II secretion system minor pseudopilin GspK	-
AM435_RS04355 (AM435_04355)	xcpW	648318..649019 (-)	702	WP_000594589.1	type II secretion system minor pseudopilin GspJ	Machinery gene
AM435_RS04360 (AM435_04360)	xcpV	649019..649399 (-)	381	WP_000836911.1	type II secretion system minor pseudopilin GspI	Machinery gene
AM435_RS04365 (AM435_04365)	-	649389..649943 (-)	555	WP_000841373.1	type II secretion system protein	-
AM435_RS04370 (AM435_04370)	-	649953..650561 (-)	609	WP_000375838.1	TetR/AcrR family transcriptional regulator	-
AM435_RS04375 (AM435_04375)	-	650599..651372 (-)	774	WP_000497298.1	TatD family hydrolase	-
AM435_RS04380 (AM435_04380)	-	651390..651731 (-)	342	WP_001183024.1	PilZ domain-containing protein	-
AM435_RS04385 (AM435_04385)	-	651743..652723 (-)	981	WP_001075411.1	DNA polymerase III subunit delta'	-
AM435_RS04390 (AM435_04390)	kdsB	652735..653496 (-)	762	WP_000680697.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 233 a.a.
• Molecular weight: 26639.58 Da
• Isoelectric Point: 9.3468

>NTDB_id=271845 AM435_RS04355 WP_000594589.1 648318..649019(-) (xcpW) [Acinetobacter baumannii strain AR_0056]
MIKNKYIHIRSIDSRLAARSSSARLTRASGFTLVELLVAIAIFAVLSLLGWKIFDYLLKVRDRNAEHEVHLFELQDAYQQ
ILRDTLQIIPLSANQGGQLHPALEIDNQILRFSKAGVTDPLKQGLSPFERIEYRYDADQKKLYRLKYTNLNTSNREQPLS
STLLSQVDQYQIMVLTPQEVTKWPEVNIDPTKPNELKKLPKGIKIQLTVAGVNYEWIYSLNQGDLSLSQEGNS

Nucleotide

• Length: 702 bp

>NTDB_id=271845 AM435_RS04355 WP_000594589.1 648318..649019(-) (xcpW) [Acinetobacter baumannii strain AR_0056]
ATGATAAAAAATAAATATATTCACATCCGAAGCATTGATTCTCGCCTTGCAGCACGATCGAGCAGTGCTCGATTAACTCG
CGCCTCAGGATTTACTTTGGTTGAATTGTTAGTCGCGATCGCTATCTTTGCGGTTTTATCTTTATTGGGGTGGAAAATTT
TCGATTACTTGCTCAAAGTTCGTGATCGTAATGCCGAACATGAAGTGCATTTATTTGAATTACAAGATGCTTATCAACAA
ATTCTTCGTGATACTTTGCAGATTATCCCTTTATCCGCAAACCAAGGTGGTCAACTTCATCCAGCTTTAGAAATCGATAA
TCAAATTTTACGTTTTAGCAAAGCAGGCGTAACGGATCCTTTAAAACAAGGCTTATCACCATTTGAACGAATTGAATATC
GTTATGATGCAGACCAAAAAAAATTATATCGTCTTAAATATACAAATTTGAATACTTCGAACAGAGAGCAACCTTTATCG
AGTACTTTGTTAAGTCAAGTCGACCAATATCAGATTATGGTTTTGACTCCGCAAGAAGTCACAAAATGGCCCGAGGTTAA
TATTGATCCAACGAAACCTAATGAGTTAAAAAAATTACCGAAAGGGATAAAAATCCAACTTACAGTCGCTGGTGTAAATT
ATGAGTGGATTTATAGCTTAAATCAGGGTGACTTATCGCTTTCGCAGGAAGGTAATTCATAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (27-49)

• Type II secretion system (T2SS), protein J (T2SSJ) (83-212)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	99.571	100	0.996