Detailed information    

insolico Bioinformatically predicted

Overview


Name   mecA   Type   Regulator
Locus tag   C2I25_RS05440 Genome accession   NZ_CP026678
Coordinates   1040742..1041425 (-) Length   227 a.a.
NCBI ID   WP_000350715.1    Uniprot ID   A0AAN4HLX4
Organism   Bacillus cereus strain TG1-6     
Function   degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context


Location: 1035742..1046425
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  C2I25_RS05425 (C2I25_05425) pepF 1035923..1037749 (-) 1827 WP_106822774.1 oligoendopeptidase F Regulator
  C2I25_RS05430 (C2I25_05430) - 1037800..1039044 (-) 1245 WP_106822776.1 competence protein CoiA -
  C2I25_RS05435 (C2I25_05435) - 1039125..1040669 (-) 1545 WP_000799191.1 cardiolipin synthase -
  C2I25_RS05440 (C2I25_05440) mecA 1040742..1041425 (-) 684 WP_000350715.1 adaptor protein MecA Regulator
  C2I25_RS05445 (C2I25_05445) - 1041771..1042445 (+) 675 WP_000362612.1 TerC family protein -
  C2I25_RS05450 (C2I25_05450) spx 1042495..1042890 (-) 396 WP_000258267.1 transcriptional regulator Spx -
  C2I25_RS05460 (C2I25_05460) - 1043484..1043687 (+) 204 WP_000559971.1 hypothetical protein -
  C2I25_RS05465 (C2I25_05465) - 1043717..1045363 (-) 1647 WP_023521425.1 peptide ABC transporter substrate-binding protein -

Sequence


Protein


Download         Length: 227 a.a.        Molecular weight: 26996.03 Da        Isoelectric Point: 3.9822

>NTDB_id=271641 C2I25_RS05440 WP_000350715.1 1040742..1041425(-) (mecA) [Bacillus cereus strain TG1-6]
MDIERINDHTMKFFITYIDIEDRGFNREEIWYDRERSEELFWEMMDEARDHDDFFIDGPLWIQVQAVDKGIEVLVTKAEL
SKDGQKLELPIGVDKIIDIPLDEGIESLFQQELVEEVEEQTGTNFNEDGTFGFLIKFNDFEDVISLSHRLIFEDIKDELY
SFEDRYYVYVEFDEVLHDEEEIDRILSIVLEYGEESTLTIHRVSEYGKQIVKEHALETIRNNFPAKT

Nucleotide


Download         Length: 684 bp        

>NTDB_id=271641 C2I25_RS05440 WP_000350715.1 1040742..1041425(-) (mecA) [Bacillus cereus strain TG1-6]
TTGGATATTGAAAGAATTAATGATCATACGATGAAATTTTTTATTACGTACATTGATATAGAGGATAGAGGATTTAATCG
TGAAGAAATTTGGTATGATCGCGAACGAAGTGAAGAGCTCTTTTGGGAGATGATGGACGAAGCTCGTGATCATGACGATT
TCTTTATTGATGGGCCGTTATGGATTCAAGTGCAAGCAGTCGATAAAGGGATTGAAGTACTTGTCACGAAAGCAGAGCTT
TCAAAGGACGGACAAAAGCTGGAACTACCGATAGGGGTAGACAAAATTATAGATATTCCTCTAGATGAAGGCATCGAATC
ATTATTCCAACAAGAGTTAGTCGAAGAGGTAGAAGAACAAACAGGAACAAACTTTAATGAAGATGGTACGTTTGGCTTTT
TAATTAAATTTAATGATTTTGAAGATGTCATTTCATTAAGTCATCGTCTTATCTTTGAAGATATAAAAGATGAGCTGTAT
TCATTTGAGGACCGCTATTATGTATATGTGGAATTCGATGAAGTGCTACATGATGAAGAAGAAATCGATCGTATTTTAAG
TATTGTTTTAGAATATGGGGAAGAATCAACTTTAACAATTCATCGTGTAAGTGAGTATGGAAAACAAATTGTGAAAGAGC
ATGCGCTTGAAACGATTCGCAATAATTTTCCTGCTAAAACGTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mecA Bacillus subtilis subsp. subtilis str. 168

55.702

100

0.559


Multiple sequence alignment