Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | C3Y93_RS01710 | Genome accession | NZ_CP026616 |
| Coordinates | 352203..352583 (+) | Length | 126 a.a. |
| NCBI ID | WP_004976793.1 | Uniprot ID | A0A2A5PJN4 |
| Organism | Acinetobacter sp. SWBY1 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 347203..357583
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3Y93_RS01680 (C3Y93_01680) | kdsB | 348032..348793 (+) | 762 | WP_104851892.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
| C3Y93_RS01685 (C3Y93_01685) | - | 348808..349797 (+) | 990 | WP_104851893.1 | DNA polymerase III subunit delta' C-terminal domain-containing protein | - |
| C3Y93_RS01690 (C3Y93_01690) | - | 349808..350149 (+) | 342 | WP_026438361.1 | PilZ domain-containing protein | - |
| C3Y93_RS01695 (C3Y93_01695) | - | 350174..350947 (+) | 774 | WP_104851894.1 | TatD family hydrolase | - |
| C3Y93_RS01700 (C3Y93_01700) | - | 351041..351655 (+) | 615 | WP_004976797.1 | TetR/AcrR family transcriptional regulator | - |
| C3Y93_RS01705 (C3Y93_01705) | - | 351662..352213 (+) | 552 | WP_104851895.1 | type II secretion system protein | - |
| C3Y93_RS01710 (C3Y93_01710) | xcpV | 352203..352583 (+) | 381 | WP_004976793.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| C3Y93_RS01715 (C3Y93_01715) | xcpW | 352580..353203 (+) | 624 | WP_104851896.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| C3Y93_RS01720 (C3Y93_01720) | gspK | 353217..354200 (+) | 984 | WP_171287376.1 | type II secretion system minor pseudopilin GspK | - |
| C3Y93_RS01725 (C3Y93_01725) | - | 354376..354972 (+) | 597 | WP_104851897.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| C3Y93_RS01730 (C3Y93_01730) | ung | 355010..355723 (+) | 714 | WP_104851898.1 | uracil-DNA glycosylase | - |
| C3Y93_RS01735 (C3Y93_01735) | - | 355720..356841 (+) | 1122 | WP_004976784.1 | enoyl-CoA hydratase/isomerase family protein | - |
| C3Y93_RS01740 (C3Y93_01740) | tadA | 356869..357360 (+) | 492 | WP_004976782.1 | tRNA adenosine(34) deaminase TadA | - |
Sequence
Protein
Download Length: 126 a.a. Molecular weight: 13964.99 Da Isoelectric Point: 6.2920
>NTDB_id=270891 C3Y93_RS01710 WP_004976793.1 352203..352583(+) (xcpV) [Acinetobacter sp. SWBY1]
MKAKGFTLLEVMVALAIFATAAMAMTKVAMQYTQSTANAILRTKAQFVALNEVALMEMNRQWLSGTESKQVTQQGETWQI
DKSTQPTISPNVQRVDLQISLYNQDTGQVEAGVTSLVFFNAREQQS
MKAKGFTLLEVMVALAIFATAAMAMTKVAMQYTQSTANAILRTKAQFVALNEVALMEMNRQWLSGTESKQVTQQGETWQI
DKSTQPTISPNVQRVDLQISLYNQDTGQVEAGVTSLVFFNAREQQS
Nucleotide
Download Length: 381 bp
>NTDB_id=270891 C3Y93_RS01710 WP_004976793.1 352203..352583(+) (xcpV) [Acinetobacter sp. SWBY1]
ATGAAAGCTAAAGGATTTACACTACTTGAAGTTATGGTGGCTTTGGCAATTTTTGCAACAGCAGCTATGGCAATGACCAA
AGTGGCGATGCAATATACCCAATCCACCGCCAATGCAATTTTAAGAACCAAAGCACAATTTGTGGCTTTGAATGAAGTGG
CATTGATGGAAATGAATCGGCAATGGTTAAGTGGAACAGAGTCAAAGCAAGTGACACAACAGGGCGAAACATGGCAAATT
GACAAGTCCACACAGCCAACCATTAGTCCGAATGTGCAACGTGTCGATCTTCAAATCAGTTTATATAATCAAGACACAGG
ACAAGTTGAAGCAGGAGTGACTTCTTTGGTGTTTTTTAATGCCCGTGAGCAGCAATCATGA
ATGAAAGCTAAAGGATTTACACTACTTGAAGTTATGGTGGCTTTGGCAATTTTTGCAACAGCAGCTATGGCAATGACCAA
AGTGGCGATGCAATATACCCAATCCACCGCCAATGCAATTTTAAGAACCAAAGCACAATTTGTGGCTTTGAATGAAGTGG
CATTGATGGAAATGAATCGGCAATGGTTAAGTGGAACAGAGTCAAAGCAAGTGACACAACAGGGCGAAACATGGCAAATT
GACAAGTCCACACAGCCAACCATTAGTCCGAATGTGCAACGTGTCGATCTTCAAATCAGTTTATATAATCAAGACACAGG
ACAAGTTGAAGCAGGAGTGACTTCTTTGGTGTTTTTTAATGCCCGTGAGCAGCAATCATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
77.5 |
95.238 |
0.738 |