Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptB   Type   Regulator
Locus tag   D1F63_RS07750 Genome accession   NZ_CP031770
Coordinates   1480482..1481516 (-) Length   344 a.a.
NCBI ID   WP_010922583.1    Uniprot ID   A0A0H2UWB0
Organism   Streptococcus pyogenes strain SASM4-Duke     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1475482..1486516
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  D1F63_RS07715 (D1F63_07715) - 1476258..1476560 (-) 303 WP_002983488.1 YlxQ-related RNA-binding protein -
  D1F63_RS07720 (D1F63_07720) rnpM 1476553..1476849 (-) 297 WP_002983486.1 RNase P modulator RnpM -
  D1F63_RS07725 (D1F63_07725) nusA 1476865..1478022 (-) 1158 WP_002983485.1 transcription termination factor NusA -
  D1F63_RS07730 (D1F63_07730) rimP 1478197..1478733 (-) 537 WP_011528897.1 ribosome maturation factor RimP -
  D1F63_RS07740 (D1F63_07740) trmB 1478992..1479627 (-) 636 WP_002983387.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  D1F63_RS07745 (D1F63_07745) ccrZ 1479627..1480418 (-) 792 WP_002983385.1 cell cycle regulator CcrZ -
  D1F63_RS07750 (D1F63_07750) pptB 1480482..1481516 (-) 1035 WP_010922583.1 ABC transporter permease Regulator
  D1F63_RS07755 (D1F63_07755) pptA 1481519..1482244 (-) 726 WP_002983379.1 ABC transporter ATP-binding protein Regulator
  D1F63_RS07760 (D1F63_07760) - 1482316..1482735 (+) 420 WP_002983376.1 HIT family protein -
  D1F63_RS07765 (D1F63_07765) - 1482732..1483088 (+) 357 WP_002983373.1 hypothetical protein -
  D1F63_RS07770 (D1F63_07770) - 1483199..1484482 (-) 1284 WP_002983372.1 LCP family protein -
  D1F63_RS07775 (D1F63_07775) - 1484491..1485015 (-) 525 WP_002994338.1 GNAT family N-acetyltransferase -
  D1F63_RS07780 (D1F63_07780) tsaE 1484990..1485451 (-) 462 WP_002988647.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -

Sequence

Protein


Download         Length: 344 a.a.        Molecular weight: 40274.52 Da        Isoelectric Point: 10.3713

>NTDB_id=270854 D1F63_RS07750 WP_010922583.1 1480482..1481516(-) (pptB) [Streptococcus pyogenes strain SASM4-Duke]
MKALFLKRRQDFQKQQNKYLRYVLNDHFVLVLMFLLGFAMVQYGQLLNHFPTNHLPIQVCLGILIPLLLSMGSIATYLEE
ADQHFLLPKEEEVISYIKQAERLSFLLWGTLQTAVLLFLYPIFRRLGLSLFIFIILVLILLALKRVVLSRKTRYFLRGNR
LDWAKAVAFESNRKQSILKFYSLFTTVKGISTKVKERTYLNPLLKLVKQTPSNLWLSLYARAFLRSSDYLGLFLRLMLLS
SLSVFFIHNLYLSVSLALIFNYLVVFQLLSLYYHYDYHYMTSLYPENSRSKKKNMLSFLRGLSFLMLIVNMLCCSSAPKA
LILIVGMVFIACIYLPYKLKKIID

Nucleotide


Download         Length: 1035 bp        

>NTDB_id=270854 D1F63_RS07750 WP_010922583.1 1480482..1481516(-) (pptB) [Streptococcus pyogenes strain SASM4-Duke]
ATGAAAGCATTATTTCTGAAACGCCGTCAAGACTTTCAAAAACAACAAAACAAATACCTTCGTTACGTCTTAAATGATCA
CTTTGTTTTGGTGTTGATGTTTTTATTAGGCTTTGCTATGGTGCAGTATGGTCAGCTACTAAACCATTTTCCAACGAATC
ATCTACCTATTCAGGTTTGTCTTGGGATATTGATCCCATTATTGCTCAGTATGGGATCTATAGCAACGTATCTAGAAGAG
GCAGATCAGCATTTCTTACTTCCAAAAGAAGAAGAAGTGATTTCTTATATCAAACAAGCTGAGCGACTCTCTTTTTTGCT
TTGGGGAACTTTGCAGACTGCTGTATTGCTCTTTTTATATCCTATTTTTAGACGTTTAGGTCTGTCTTTATTTATTTTTA
TTATCTTAGTTTTGATATTATTGGCACTAAAAAGAGTAGTGCTTAGTCGAAAGACAAGATATTTTTTGAGAGGAAATCGT
TTAGATTGGGCAAAAGCTGTCGCATTTGAAAGCAATCGCAAGCAAAGTATTTTAAAGTTTTATTCTCTTTTTACAACAGT
CAAAGGAATTTCTACAAAAGTGAAAGAAAGAACTTATCTAAATCCTCTTTTAAAATTAGTTAAGCAAACTCCTTCAAACC
TTTGGCTGTCCCTTTATGCTAGAGCCTTTTTACGTAGTTCAGATTATTTGGGCTTATTTTTACGACTAATGCTATTAAGC
TCATTATCTGTATTTTTTATCCATAATCTTTATTTGTCAGTAAGTTTAGCACTCATTTTTAACTATTTAGTTGTATTCCA
ATTACTTTCACTTTATTATCACTACGATTACCATTATATGACTAGTCTTTATCCTGAAAATAGTCGGAGCAAGAAGAAAA
ATATGTTAAGTTTTTTACGAGGTTTAAGCTTTTTAATGTTAATCGTCAATATGCTGTGTTGCTCATCAGCGCCAAAAGCA
CTCATTTTGATTGTAGGTATGGTTTTCATAGCTTGTATATATCTACCTTATAAGTTAAAGAAGATCATTGACTAA

Domains

Predicted by InterProScan.

Bacterial ABC transporter protein EcsB (EcsB)

(158-330)

Bacterial ABC transporter protein EcsB (EcsB)

(2-151)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H2UWB0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptB Streptococcus thermophilus LMD-9

43.023

100

0.43
  pptB Streptococcus salivarius strain HSISS4

42.733

100

0.427