Detailed information    

insolico Bioinformatically predicted

Overview

Name   MMJJ_RS05685   Type   Machinery gene
Locus tag   MMJJ_RS02285 Genome accession   NZ_CP026606
Coordinates   432913..433134 (+) Length   73 a.a.
NCBI ID   WP_104837498.1    Uniprot ID   A0A2L1CAH8
Organism   Methanococcus maripaludis strain DSM 2067     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 427913..438134
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MMJJ_RS02270 (MMJJ_04560) - 429486..429995 (-) 510 WP_011170475.1 HEPN domain-containing protein -
  MMJJ_RS02275 (MMJJ_04570) - 429982..430599 (-) 618 WP_104837496.1 nucleotidyltransferase domain-containing protein -
  MMJJ_RS02280 (MMJJ_04580) - 430831..432489 (+) 1659 WP_104837497.1 SulP family inorganic anion transporter -
  MMJJ_RS02285 (MMJJ_04590) MMJJ_RS05685 432913..433134 (+) 222 WP_104837498.1 class III signal peptide-containing protein Machinery gene
  MMJJ_RS02290 (MMJJ_04600) - 433136..433762 (-) 627 WP_104837499.1 helix-turn-helix transcriptional regulator -
  MMJJ_RS02295 (MMJJ_04610) - 433776..434501 (-) 726 WP_104837500.1 hypothetical protein -
  MMJJ_RS02300 (MMJJ_04620) - 435005..435463 (+) 459 WP_104837501.1 hypothetical protein -
  MMJJ_RS02305 (MMJJ_04630) - 435503..436078 (+) 576 WP_104837502.1 hypothetical protein -
  MMJJ_RS02310 (MMJJ_04640) - 436273..436977 (+) 705 WP_104837503.1 ABC transporter ATP-binding protein -
  MMJJ_RS02315 (MMJJ_04650) - 436970..437710 (+) 741 WP_244901549.1 hypothetical protein -

Sequence

Protein


Download         Length: 73 a.a.        Molecular weight: 7775.00 Da        Isoelectric Point: 8.9020

>NTDB_id=270624 MMJJ_RS02285 WP_104837498.1 432913..433134(+) (MMJJ_RS05685) [Methanococcus maripaludis strain DSM 2067]
MFKKLYSKKGQVSMEMGILVASAVAVAAIASYFYAVNVKYSDTHAGKTAKNTSDALINVTENVCGNISEITIP

Nucleotide


Download         Length: 222 bp        

>NTDB_id=270624 MMJJ_RS02285 WP_104837498.1 432913..433134(+) (MMJJ_RS05685) [Methanococcus maripaludis strain DSM 2067]
ATGTTTAAAAAATTATATTCAAAAAAAGGACAAGTTTCAATGGAAATGGGAATCTTGGTTGCGTCTGCAGTTGCAGTTGC
AGCAATTGCAAGCTATTTTTATGCAGTAAATGTTAAATATTCGGATACACATGCTGGCAAAACTGCAAAAAATACAAGTG
ATGCCCTTATAAACGTTACAGAAAATGTTTGTGGCAACATTTCTGAAATAACTATTCCATAA

Domains

Predicted by InterproScan.

Class III signal peptide (Class_IIIsignal)

(8-34)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2L1CAH8

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  MMJJ_RS05685 Methanococcus maripaludis strain DSM 2067

55.556

98.63

0.548
  epdE Methanococcus maripaludis strain DSM 2067

44.776

91.781

0.411

Multiple sequence alignment