Detailed information    

insolico Bioinformatically predicted

Overview


Name   comD/blpH   Type   Regulator
Locus tag   SGO_RS01870 Genome accession   NC_009785
Coordinates   408707..409981 (+) Length   424 a.a.
NCBI ID   WP_065428464.1    Uniprot ID   -
Organism   Streptococcus gordonii str. Challis substr. CH1     
Function   phosphorylation of ComE; regulation of comX expression (predicted from homology)   
Competence regulation

Genomic Context


Location: 403707..414981
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SGO_RS01850 (SGO_0372) - 403981..405606 (+) 1626 WP_011999886.1 malolactic enzyme -
  SGO_RS01855 (SGO_0373) - 405683..406630 (+) 948 WP_011999887.1 AEC family transporter -
  SGO_RS10670 - 407083..407229 (-) 147 Protein_375 site-specific integrase -
  SGO_RS01865 (SGO_0374) comE/blpR 407897..408631 (+) 735 WP_011999888.1 response regulator transcription factor Regulator
  SGO_RS01870 (SGO_0375) comD/blpH 408707..409981 (+) 1275 WP_065428464.1 sensor histidine kinase Regulator
  SGO_RS01875 (SGO_0376) - 410256..410936 (+) 681 WP_011999889.1 ATP-binding cassette domain-containing protein -
  SGO_RS01880 (SGO_0377) - 410929..411648 (+) 720 WP_041789519.1 ABC transporter permease -
  SGO_RS01885 (SGO_0378) - 412000..412203 (-) 204 WP_011999891.1 CsbD family protein -
  SGO_RS01890 (SGO_0379) - 412385..413014 (-) 630 WP_011999892.1 DUF421 domain-containing protein -
  SGO_RS01895 (SGO_0380) - 413014..413466 (-) 453 WP_011999893.1 DUF3290 family protein -
  SGO_RS01900 (SGO_0381) - 413751..414299 (+) 549 WP_011999894.1 DUF6609 family protein -
  SGO_RS01905 (SGO_0382) - 414428..414939 (+) 512 Protein_384 GNAT family N-acetyltransferase -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 49777.94 Da        Isoelectric Point: 7.3740

>NTDB_id=27032 SGO_RS01870 WP_065428464.1 408707..409981(+) (comD/blpH) [Streptococcus gordonii str. Challis substr. CH1]
MLYQQITGDKVRFYLYFLLPIIFRVLFYIVPPIGYFSSLLFWLFYSLYKNKFSNRTLAVFFGLYPVVVESLFSRVIAFDL
LPMFGISINITNKFPVLSLLIELLIFPTFYYLTKTIQIDFKNLQIGFSKNQLKYYLLTFDISMAFYFILLQIFSIFTDVI
PNALKLRENLVGIYVIYFLIMLIFLHSKITDEIDRELKEQKDNQLQNLEKYSSHIESLYEEIRLFRHDYINIITSIKSGI
ELNDIASIQNVYDTVLSKTVKDFSDRKYDIANLSKIENTALKSVLSAKLLEAYNKGVEIAIEVDGRQDLYSFELLDFITI
ISILLDNAIEATLLSKDPEINIAIFSHNDRFYFIVENKTKEESVNRNNIFKNGFSTKGEERGIGLYKVTQILDKYPSASI
RTQSFSYVFRQTIEIQKNYRFSYL

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=27032 SGO_RS01870 WP_065428464.1 408707..409981(+) (comD/blpH) [Streptococcus gordonii str. Challis substr. CH1]
ATGCTATATCAACAAATTACAGGGGACAAGGTACGTTTTTATCTTTATTTTCTATTACCAATCATTTTTAGAGTATTATT
TTATATTGTTCCACCAATAGGATATTTTTCTTCATTATTATTTTGGTTATTTTACTCATTATATAAAAATAAATTTAGTA
ATCGGACATTAGCTGTATTCTTTGGTCTGTATCCAGTGGTTGTCGAGAGTTTATTTAGTAGGGTTATTGCATTTGATTTA
TTACCGATGTTTGGTATATCAATAAATATTACAAATAAATTTCCGGTATTATCACTATTAATTGAACTATTAATATTTCC
AACATTTTATTATTTGACTAAAACTATCCAGATTGACTTTAAAAATTTGCAAATTGGGTTTTCTAAAAATCAATTAAAAT
ATTATTTGTTAACATTTGATATTTCAATGGCATTTTATTTTATATTGCTTCAAATTTTTTCTATTTTTACAGACGTGATT
CCAAATGCACTTAAATTAAGAGAGAATTTAGTAGGGATATACGTCATTTACTTTCTAATTATGCTAATTTTTTTGCATTC
TAAGATCACTGATGAGATTGATAGAGAGTTGAAAGAGCAGAAAGATAACCAACTTCAGAACTTAGAAAAATATAGTAGTC
ACATTGAGTCCTTATATGAGGAGATACGATTATTTAGGCATGACTATATAAACATTATTACAAGTATAAAATCAGGTATT
GAGTTAAACGATATAGCATCTATTCAGAATGTATATGATACAGTTTTATCAAAAACCGTAAAAGATTTTTCGGATAGAAA
ATACGATATTGCTAATCTTTCCAAAATTGAAAACACTGCCCTAAAAAGTGTCTTATCAGCAAAATTACTTGAGGCTTATA
ATAAGGGGGTTGAAATTGCTATAGAGGTGGATGGTAGGCAAGATTTATATTCATTTGAATTGCTAGATTTTATTACAATT
ATTTCAATTCTTTTAGATAATGCCATAGAAGCAACATTATTATCAAAAGATCCGGAAATTAACATTGCTATTTTTTCTCA
TAATGATAGATTTTATTTTATAGTTGAAAATAAGACAAAGGAGGAAAGTGTAAATAGGAATAATATTTTTAAAAATGGTT
TTTCAACAAAAGGTGAAGAACGAGGGATAGGGTTATATAAAGTGACACAGATTTTAGATAAGTATCCTAGTGCATCTATT
AGAACTCAAAGTTTTTCATATGTGTTTAGACAGACAATAGAAATACAAAAAAACTACAGATTTAGTTATCTGTAG

Domains


Predicted by InterProScan.

(315-416)


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comD/blpH Streptococcus mutans UA159

39.44

92.689

0.366