Detailed information NTG0027024

Bioinformatically predicted

Overview

• Name: uvrA
• Type: Machinery gene
• Locus tag: VIBHAR_RS17365
• Genome accession: NC_009783
• Coordinates: 3745000..3747822 (+)
• Length: 940 a.a.
• NCBI ID: WP_012129012.1
• Uniprot ID: -
• Organism: Vibrio campbellii ATCC BAA-1116
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 3740000..3752822

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
VIBHAR_RS17345 (VIBHAR_03704)	-	3740860..3742266 (+)	1407	Protein_3342	IS4 family transposase	-
VIBHAR_RS17350 (VIBHAR_03705)	ssb	3742350..3742886 (-)	537	WP_005432828.1	single-stranded DNA-binding protein	Machinery gene
VIBHAR_RS17355 (VIBHAR_03706)	qstR	3743180..3743824 (+)	645	WP_012129010.1	LuxR C-terminal-related transcriptional regulator	Regulator
VIBHAR_RS17360 (VIBHAR_03707)	galU	3743989..3744861 (+)	873	WP_005432802.1	UTP--glucose-1-phosphate uridylyltransferase GalU	-
VIBHAR_RS17365 (VIBHAR_03708)	uvrA	3745000..3747822 (+)	2823	WP_012129012.1	excinuclease ABC subunit UvrA	Machinery gene
VIBHAR_RS17370 (VIBHAR_03709)	-	3747890..3749674 (+)	1785	WP_012129013.1	PglL family O-oligosaccharyltransferase	-
VIBHAR_RS17375 (VIBHAR_03710)	-	3749731..3750852 (-)	1122	WP_041853273.1	pyridoxal-phosphate-dependent aminotransferase family protein	-
VIBHAR_RS17380 (VIBHAR_03711)	lysC	3751378..3752730 (+)	1353	WP_012129015.1	lysine-sensitive aspartokinase 3	-

Sequence

Protein

• Length: 940 a.a.
• Molecular weight: 103974.27 Da
• Isoelectric Point: 6.3632

>NTDB_id=27024 VIBHAR_RS17365 WP_012129012.1 3745000..3747822(+) (uvrA) [Vibrio campbellii ATCC BAA-1116]
MDKIEVRGARTHNLKDINLTIPRDKLIVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAYARQFLSLMEKPDVDHIEGLS
PAISIEQKSTSHNPRSTVGTITEVYDYLRLLYARVGEPRCPTHHTPLAAQTISQMVDKVLELPEGSKMMLLAPIVKERKG
EHVKTLENLAAQGFIRARIDGETCDLSDPPPLELHKKHTIEVVVDRFKVRPDLQQRLAESFETTLELSGGIAVVAPMDGD
GEEVIFSANFACPICGYSMQELEPRLFSFNNPAGACGTCDGLGVQQYFDPSRVIQDETLSLAQGAIRGWDQKNYYYFQML
TALADHYDFDLHAPFNSLPKKTQDIILKGSGRTEVEFKYINDRGDIRVKRHPFEGILNTLERRYRDTESSSVREELAKYI
STKSCSSCDGTRLRLEARNVFIADTTLPEIVELSIADALEFFHTLKLEGQRAQIAEKVMKEINDRLQFLVNVGLNYLNLS
RSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGNTVLVVEHDEDAIRCADHVIDIG
PGAGVHGGNVVAEGTMDEIIANPNSLTGQYLSGAKEIAVPKERTPRDPKKTVELVGATGNNLKNVDLSVPVGLFSCITGV
SGSGKSTLINDTFFKIAHTQLNGATTAHPSPYKAIKGLEHFDKVIDIDQSPIGRTPRSNPATYTGIFTPIRELFAGTQES
RSRGYKPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVRYKGKTIDEVLEMTVEDARSFFD
PVPAIARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKLARELSKRDTGKTLYILDEPTTGLHFHDIQQLLTVLHRLRDH
GNTVVVIEHNLDVIKTADWIIDLGPEGGQGGGEIIAQGTPEDVSQIEGSHTARFLKPMLK

Nucleotide

• Length: 2823 bp

>NTDB_id=27024 VIBHAR_RS17365 WP_012129012.1 3745000..3747822(+) (uvrA) [Vibrio campbellii ATCC BAA-1116]
ATGGATAAAATAGAAGTTCGTGGTGCCCGCACCCATAACCTCAAAGACATCAACCTCACTATCCCCCGCGATAAACTGAT
TGTCATTACTGGTTTGAGTGGTTCTGGTAAATCCTCTCTCGCATTCGATACTTTGTACGCTGAAGGACAAAGACGTTACG
TAGAGTCACTATCAGCTTACGCGCGCCAATTTTTGTCTCTTATGGAAAAGCCAGATGTTGACCACATCGAAGGTTTGTCT
CCTGCGATCTCGATTGAGCAGAAATCAACATCACACAACCCACGTTCTACCGTCGGTACCATTACCGAGGTATACGATTA
CCTGCGTCTACTTTATGCTCGCGTTGGTGAGCCTCGTTGTCCGACGCACCATACGCCTCTAGCCGCTCAAACCATCAGCC
AGATGGTCGATAAAGTCTTAGAGTTGCCAGAAGGCAGCAAAATGATGCTACTTGCTCCTATCGTGAAAGAGCGTAAAGGT
GAGCACGTTAAGACTTTAGAGAACCTTGCTGCTCAAGGTTTCATCCGCGCACGCATCGATGGTGAAACTTGCGATCTTTC
TGATCCACCGCCGTTAGAACTGCACAAGAAACACACTATTGAAGTGGTTGTGGACCGCTTTAAAGTCCGCCCGGATTTGC
AGCAACGTTTGGCTGAATCATTCGAAACCACACTAGAGCTATCTGGAGGTATCGCTGTTGTTGCTCCAATGGACGGCGAT
GGCGAAGAGGTGATCTTCTCAGCTAACTTTGCTTGCCCTATTTGTGGCTACAGCATGCAAGAACTTGAGCCTCGTTTGTT
CTCATTCAACAACCCAGCAGGTGCGTGTGGCACTTGTGATGGTTTAGGTGTGCAGCAATATTTCGACCCAAGCCGAGTTA
TTCAAGATGAAACTCTGAGTTTGGCACAAGGTGCGATTCGAGGTTGGGATCAAAAGAACTACTATTATTTCCAGATGCTG
ACTGCGCTGGCGGATCATTACGACTTCGATCTTCACGCACCATTTAACTCTCTACCAAAGAAAACCCAAGACATCATTCT
TAAAGGATCGGGGCGTACTGAAGTAGAGTTCAAGTACATTAACGATCGTGGTGACATTCGCGTTAAGCGCCATCCTTTTG
AAGGGATCCTGAACACACTTGAACGCCGTTACCGTGATACTGAATCTAGCTCGGTACGTGAGGAGCTTGCGAAATACATC
TCTACTAAGTCTTGCTCAAGCTGTGATGGTACTCGTCTACGCCTTGAAGCTCGTAACGTCTTTATCGCCGATACGACACT
ACCGGAGATTGTTGAACTCAGCATCGCCGACGCATTGGAATTCTTCCACACTTTGAAGCTCGAAGGCCAACGCGCCCAAA
TCGCTGAAAAAGTGATGAAGGAAATCAACGACCGCCTGCAATTCTTGGTTAACGTTGGTTTGAACTACCTCAACTTATCA
CGCAGCGCGGAAACCTTATCAGGCGGTGAGGCTCAACGTATTCGTTTAGCAAGCCAAATTGGTGCGGGTCTAGTAGGTGT
TATGTACGTACTGGATGAGCCATCAATTGGTCTCCACCAGCGTGATAACGAACGTCTATTGAAAACTCTGACCCACCTAA
GAGATTTAGGTAACACAGTATTAGTGGTTGAGCACGATGAAGATGCGATTCGTTGTGCTGATCACGTGATCGATATCGGT
CCAGGTGCCGGTGTACACGGCGGTAACGTGGTCGCTGAAGGTACTATGGACGAGATCATTGCCAATCCGAACTCGCTGAC
TGGTCAGTACCTCAGTGGTGCGAAAGAGATTGCGGTACCAAAAGAGCGTACACCACGCGATCCAAAGAAAACCGTTGAAT
TAGTTGGCGCGACAGGTAACAACTTAAAGAATGTCGACCTTTCCGTTCCTGTTGGATTGTTCAGTTGTATTACCGGTGTA
TCCGGCTCAGGTAAGTCGACTCTGATCAACGATACCTTCTTTAAGATTGCTCATACCCAGTTGAACGGCGCAACAACGGC
GCACCCTTCACCATACAAAGCGATCAAAGGTTTAGAGCATTTCGATAAAGTTATCGACATTGACCAAAGCCCTATCGGTC
GTACACCACGTTCAAACCCAGCCACTTACACGGGAATCTTTACTCCGATTCGTGAACTGTTTGCTGGCACGCAAGAGTCG
CGCTCTCGTGGTTACAAACCGGGGCGCTTTAGCTTTAACGTACGCGGAGGTCGCTGTGAAGCGTGTCAGGGTGATGGTGT
AATCAAGGTAGAAATGCACTTCTTACCTGACGTTTACGTTCCTTGTGATGTATGTAAAGGTAAACGCTACAACCGCGAAA
CACTTGAAGTACGTTACAAAGGCAAGACCATTGATGAAGTATTGGAAATGACGGTAGAAGATGCACGTTCTTTCTTCGAT
CCAGTTCCAGCAATTGCTCGCAAGCTGCAAACTCTGATGGATGTAGGCTTGTCTTACATTCGCTTAGGTCAAGCGGCAAC
TACGCTGTCAGGTGGCGAAGCTCAGCGTGTAAAACTGGCTCGAGAGCTGTCTAAGCGTGATACTGGTAAAACCTTATACA
TTTTGGATGAACCGACAACAGGTCTGCACTTCCACGATATCCAGCAGCTACTAACTGTACTGCACCGTCTGCGCGACCAC
GGAAATACCGTTGTCGTCATTGAGCATAACCTCGATGTCATTAAGACGGCAGACTGGATTATTGACTTAGGTCCTGAAGG
TGGACAAGGCGGCGGTGAGATCATCGCACAAGGAACGCCTGAAGATGTGTCTCAGATCGAAGGTTCGCACACAGCTCGCT
TCCTTAAGCCTATGTTGAAGTAG

Domains

Predicted by InterProScan.

• UvrA DNA-binding domain (UvrA_DNA-bind) (289-398)

• UvrA interaction domain (UvrA_inter) (130-237)

• ABC transporter (ABC_tran) (622-859)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
uvrA	Streptococcus pneumoniae R6	57.431	100	0.576
uvrA	Streptococcus pneumoniae TIGR4	57.431	100	0.576
uvrA	Streptococcus pneumoniae D39	57.431	100	0.576