Detailed information
Bioinformatically predicted
Overview
| Name | xcpV | Type | Machinery gene |
| Locus tag | C3F34_RS17675 | Genome accession | NZ_CP026412 |
| Coordinates | 3696645..3697016 (-) | Length | 123 a.a. |
| NCBI ID | WP_104442219.1 | Uniprot ID | A0A2L0HZF3 |
| Organism | Acinetobacter sp. ACNIH2 | ||
| Function | pseudopilus assembly (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 3691645..3702016
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3F34_RS17645 (C3F34_17640) | tadA | 3691926..3692441 (-) | 516 | WP_044740025.1 | tRNA adenosine(34) deaminase TadA | - |
| C3F34_RS17650 (C3F34_17645) | - | 3692446..3693570 (-) | 1125 | WP_104442217.1 | enoyl-CoA hydratase/isomerase family protein | - |
| C3F34_RS17655 (C3F34_17650) | ung | 3693567..3694280 (-) | 714 | WP_104442218.1 | uracil-DNA glycosylase | - |
| C3F34_RS17660 (C3F34_17655) | - | 3694323..3694919 (-) | 597 | WP_044740028.1 | 6-pyruvoyl trahydropterin synthase family protein | - |
| C3F34_RS17665 (C3F34_17660) | gspK | 3695028..3695974 (-) | 947 | Protein_3441 | type II secretion system minor pseudopilin GspK | - |
| C3F34_RS17670 (C3F34_17665) | xcpW | 3696016..3696642 (-) | 627 | WP_044740030.1 | type II secretion system minor pseudopilin GspJ | Machinery gene |
| C3F34_RS17675 (C3F34_17670) | xcpV | 3696645..3697016 (-) | 372 | WP_104442219.1 | type II secretion system minor pseudopilin GspI | Machinery gene |
| C3F34_RS17680 (C3F34_17675) | - | 3697006..3697557 (-) | 552 | WP_104442220.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | - |
| C3F34_RS17685 (C3F34_17680) | - | 3697569..3698168 (-) | 600 | WP_016167682.1 | TetR/AcrR family transcriptional regulator | - |
| C3F34_RS17690 (C3F34_17685) | - | 3698223..3698996 (-) | 774 | WP_044740034.1 | TatD family hydrolase | - |
| C3F34_RS17695 (C3F34_17690) | - | 3699022..3699363 (-) | 342 | WP_016167680.1 | PilZ domain-containing protein | - |
| C3F34_RS17700 (C3F34_17695) | - | 3699375..3700361 (-) | 987 | WP_104442382.1 | DNA polymerase III subunit delta' | - |
| C3F34_RS17705 (C3F34_17700) | kdsB | 3700374..3701135 (-) | 762 | WP_104442221.1 | 3-deoxy-manno-octulosonate cytidylyltransferase | - |
Sequence
Protein
Download Length: 123 a.a. Molecular weight: 13643.57 Da Isoelectric Point: 6.4684
>NTDB_id=269205 C3F34_RS17675 WP_104442219.1 3696645..3697016(-) (xcpV) [Acinetobacter sp. ACNIH2]
MKSKGFTLLEVMVALAIFATAAIALTKVAMQYTQATAQAILRTKAQFVAQNEIAEMQIKGEWLDGTQSEQLSQQGEHWQV
EKSAQSTISPDVQRVEIQVRLFNTETGKAEAGVTHLVFFNNRT
MKSKGFTLLEVMVALAIFATAAIALTKVAMQYTQATAQAILRTKAQFVAQNEIAEMQIKGEWLDGTQSEQLSQQGEHWQV
EKSAQSTISPDVQRVEIQVRLFNTETGKAEAGVTHLVFFNNRT
Nucleotide
Download Length: 372 bp
>NTDB_id=269205 C3F34_RS17675 WP_104442219.1 3696645..3697016(-) (xcpV) [Acinetobacter sp. ACNIH2]
ATGAAATCTAAAGGGTTTACACTATTAGAAGTCATGGTGGCTTTGGCGATTTTTGCAACAGCGGCAATTGCATTGACCAA
AGTCGCAATGCAATATACGCAAGCAACAGCACAGGCAATTTTACGAACGAAAGCTCAGTTTGTTGCACAGAATGAAATTG
CTGAAATGCAAATTAAAGGTGAATGGTTGGATGGCACTCAATCCGAACAACTTTCCCAGCAGGGTGAGCATTGGCAAGTA
GAGAAAAGCGCACAATCCACAATTAGCCCAGATGTGCAACGGGTAGAAATACAAGTACGGTTGTTTAATACAGAAACTGG
TAAGGCGGAAGCGGGAGTTACCCATCTGGTCTTTTTTAATAATAGAACATAA
ATGAAATCTAAAGGGTTTACACTATTAGAAGTCATGGTGGCTTTGGCGATTTTTGCAACAGCGGCAATTGCATTGACCAA
AGTCGCAATGCAATATACGCAAGCAACAGCACAGGCAATTTTACGAACGAAAGCTCAGTTTGTTGCACAGAATGAAATTG
CTGAAATGCAAATTAAAGGTGAATGGTTGGATGGCACTCAATCCGAACAACTTTCCCAGCAGGGTGAGCATTGGCAAGTA
GAGAAAAGCGCACAATCCACAATTAGCCCAGATGTGCAACGGGTAGAAATACAAGTACGGTTGTTTAATACAGAAACTGG
TAAGGCGGAAGCGGGAGTTACCCATCTGGTCTTTTTTAATAATAGAACATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| xcpV | Acinetobacter baumannii D1279779 |
70.833 |
97.561 |
0.691 |