Detailed information NTG0269204

Bioinformatically predicted

Overview

• Name: xcpW
• Type: Machinery gene
• Locus tag: C3F34_RS17670
• Genome accession: NZ_CP026412
• Coordinates: 3696016..3696642 (-)
• Length: 208 a.a.
• NCBI ID: WP_044740030.1
• Uniprot ID: A0A5N4WC53
• Organism: Acinetobacter sp. ACNIH2
• Function: pseudopilus assembly (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3691016..3701642

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
C3F34_RS17640 (C3F34_17635)	-	3691437..3691868 (-)	432	WP_016167691.1	SRPBCC family protein	-
C3F34_RS17645 (C3F34_17640)	tadA	3691926..3692441 (-)	516	WP_044740025.1	tRNA adenosine(34) deaminase TadA	-
C3F34_RS17650 (C3F34_17645)	-	3692446..3693570 (-)	1125	WP_104442217.1	enoyl-CoA hydratase/isomerase family protein	-
C3F34_RS17655 (C3F34_17650)	ung	3693567..3694280 (-)	714	WP_104442218.1	uracil-DNA glycosylase	-
C3F34_RS17660 (C3F34_17655)	-	3694323..3694919 (-)	597	WP_044740028.1	6-pyruvoyl trahydropterin synthase family protein	-
C3F34_RS17665 (C3F34_17660)	gspK	3695028..3695974 (-)	947	Protein_3441	type II secretion system minor pseudopilin GspK	-
C3F34_RS17670 (C3F34_17665)	xcpW	3696016..3696642 (-)	627	WP_044740030.1	type II secretion system minor pseudopilin GspJ	Machinery gene
C3F34_RS17675 (C3F34_17670)	xcpV	3696645..3697016 (-)	372	WP_104442219.1	type II secretion system minor pseudopilin GspI	Machinery gene
C3F34_RS17680 (C3F34_17675)	-	3697006..3697557 (-)	552	WP_104442220.1	prepilin-type N-terminal cleavage/methylation domain-containing protein	-
C3F34_RS17685 (C3F34_17680)	-	3697569..3698168 (-)	600	WP_016167682.1	TetR/AcrR family transcriptional regulator	-
C3F34_RS17690 (C3F34_17685)	-	3698223..3698996 (-)	774	WP_044740034.1	TatD family hydrolase	-
C3F34_RS17695 (C3F34_17690)	-	3699022..3699363 (-)	342	WP_016167680.1	PilZ domain-containing protein	-
C3F34_RS17700 (C3F34_17695)	-	3699375..3700361 (-)	987	WP_104442382.1	DNA polymerase III subunit delta'	-
C3F34_RS17705 (C3F34_17700)	kdsB	3700374..3701135 (-)	762	WP_104442221.1	3-deoxy-manno-octulosonate cytidylyltransferase	-

Sequence

Protein

• Length: 208 a.a.
• Molecular weight: 23774.28 Da
• Isoelectric Point: 7.2033

>NTDB_id=269204 C3F34_RS17670 WP_044740030.1 3696016..3696642(-) (xcpW) [Acinetobacter sp. ACNIH2]
MHKRAGFTLVELLVAIAIFAVLSALGWKVFDYLIKVKERNAQHEQKLANLQQAYQQILKDSIQIAPLTSNINGEIEPALV
LQNERFAFSKIGVTDPLLQGIPAEERIQYQYQADTQRLNRLRSRGLNAATQIQPESSVLLENVEQFQVRVLNPNELTTWP
EFAEQQDDLVQKKKLPKGIKINLTVNGVAYEWVFSLLNTDYLEQKQKS

Nucleotide

• Length: 627 bp

>NTDB_id=269204 C3F34_RS17670 WP_044740030.1 3696016..3696642(-) (xcpW) [Acinetobacter sp. ACNIH2]
ATGCACAAACGAGCTGGTTTTACTTTGGTCGAGCTGTTAGTTGCTATTGCAATTTTTGCAGTATTATCTGCTTTGGGGTG
GAAAGTTTTTGATTATTTAATAAAAGTAAAAGAACGTAATGCTCAACATGAACAAAAACTGGCGAATTTACAACAAGCCT
ATCAGCAGATTTTAAAAGATAGTATTCAGATTGCACCGTTGACCTCAAATATAAATGGTGAAATTGAACCTGCTTTGGTT
TTGCAGAATGAACGTTTTGCTTTTAGTAAAATAGGCGTCACAGATCCGCTATTACAGGGTATTCCAGCAGAGGAACGTAT
CCAATATCAATATCAGGCAGATACACAACGATTAAATCGATTACGTTCACGTGGTTTAAATGCAGCAACACAGATACAAC
CTGAGTCGAGTGTATTGCTTGAAAATGTTGAGCAATTTCAGGTGAGAGTATTGAACCCGAATGAACTCACGACTTGGCCT
GAATTTGCAGAACAGCAAGATGATTTGGTGCAAAAAAAGAAACTACCAAAGGGAATAAAAATAAATTTAACAGTCAATGG
TGTGGCCTATGAATGGGTATTTAGTCTGCTGAATACAGATTATTTAGAGCAGAAACAAAAGAGTTAA

Domains

Predicted by InterproScan.

• Prokaryotic N-terminal methylation motif (N_methyl) (1-25)

• Type II secretion system (T2SS), protein J (T2SSJ) (73-190)

3D structure

• AlphaFold DB: A0A5N4WC53

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
xcpW	Acinetobacter baumannii D1279779	56.5	96.154	0.543