Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | C3F34_RS07685 | Genome accession | NZ_CP026412 |
| Coordinates | 1645001..1645600 (+) | Length | 199 a.a. |
| NCBI ID | WP_104441360.1 | Uniprot ID | A0A5N4WJM0 |
| Organism | Acinetobacter sp. ACNIH2 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 1640001..1650600
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| C3F34_RS07660 (C3F34_07660) | - | 1640120..1640926 (-) | 807 | WP_104441356.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| C3F34_RS07665 (C3F34_07665) | - | 1641020..1641391 (-) | 372 | WP_104441357.1 | MerR family transcriptional regulator | - |
| C3F34_RS07670 (C3F34_07670) | tenA | 1641463..1642137 (-) | 675 | WP_104441358.1 | thiaminase II | - |
| C3F34_RS07675 (C3F34_07675) | - | 1642349..1643434 (+) | 1086 | WP_016168791.1 | DUF475 domain-containing protein | - |
| C3F34_RS07680 (C3F34_07680) | - | 1643585..1644949 (+) | 1365 | WP_104441359.1 | MFS transporter | - |
| C3F34_RS07685 (C3F34_07685) | ssb | 1645001..1645600 (+) | 600 | WP_104441360.1 | single-stranded DNA-binding protein | Machinery gene |
| C3F34_RS07690 (C3F34_07690) | - | 1646127..1647566 (+) | 1440 | WP_044738917.1 | amino acid permease | - |
| C3F34_RS07695 (C3F34_07695) | - | 1647639..1649138 (-) | 1500 | WP_213064798.1 | PLP-dependent aminotransferase family protein | - |
| C3F34_RS07700 (C3F34_07700) | gabT | 1649295..1650593 (+) | 1299 | WP_016168786.1 | 4-aminobutyrate--2-oxoglutarate transaminase | - |
Sequence
Protein
Download Length: 199 a.a. Molecular weight: 21775.42 Da Isoelectric Point: 6.4819
>NTDB_id=269181 C3F34_RS07685 WP_104441360.1 1645001..1645600(+) (ssb) [Acinetobacter sp. ACNIH2]
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSNRQQGEGVPSDNAGFNQPRFNNNQNSGYGNNTGYNNNNNNQGYGNAGGFN
NNQGGGNQGGYGNNNPGGFAPKAAPSAPAPADLDDDLPF
MRGVNKVILVGTLGRDPETKTFPNGGSLTQFSIATSDSWTDKSTGERKEQTEWHRIVLHNRLGEIAQQYLRKGSKVYIEG
SLRTRQWTDQNGQERYTTEIRGEQMQMLDSNRQQGEGVPSDNAGFNQPRFNNNQNSGYGNNTGYNNNNNNQGYGNAGGFN
NNQGGGNQGGYGNNNPGGFAPKAAPSAPAPADLDDDLPF
Nucleotide
Download Length: 600 bp
>NTDB_id=269181 C3F34_RS07685 WP_104441360.1 1645001..1645600(+) (ssb) [Acinetobacter sp. ACNIH2]
ATGCGCGGTGTAAATAAAGTTATTTTAGTGGGCACATTAGGCCGAGATCCAGAGACGAAAACTTTTCCAAATGGGGGCTC
GCTTACTCAGTTTTCAATCGCAACCAGCGATTCTTGGACTGACAAAAGCACAGGTGAACGTAAAGAACAAACTGAATGGC
ACCGAATTGTCTTGCACAATCGTTTAGGTGAAATTGCTCAGCAATATTTGCGTAAAGGTTCGAAGGTTTATATTGAAGGT
TCATTGCGTACGCGCCAATGGACAGATCAAAATGGTCAAGAACGTTACACCACAGAGATTCGTGGTGAACAAATGCAAAT
GCTTGATTCGAACCGTCAGCAAGGTGAAGGTGTGCCAAGCGATAACGCTGGGTTTAACCAACCGCGTTTTAACAATAACC
AGAACAGTGGTTATGGCAATAACACGGGTTATAACAACAATAATAATAACCAAGGTTATGGCAACGCAGGCGGTTTTAAC
AATAATCAGGGCGGCGGTAACCAAGGTGGTTATGGCAACAATAATCCAGGTGGTTTTGCACCTAAGGCAGCTCCTTCTGC
ACCAGCACCTGCAGATTTGGATGATGATTTACCGTTCTAG
ATGCGCGGTGTAAATAAAGTTATTTTAGTGGGCACATTAGGCCGAGATCCAGAGACGAAAACTTTTCCAAATGGGGGCTC
GCTTACTCAGTTTTCAATCGCAACCAGCGATTCTTGGACTGACAAAAGCACAGGTGAACGTAAAGAACAAACTGAATGGC
ACCGAATTGTCTTGCACAATCGTTTAGGTGAAATTGCTCAGCAATATTTGCGTAAAGGTTCGAAGGTTTATATTGAAGGT
TCATTGCGTACGCGCCAATGGACAGATCAAAATGGTCAAGAACGTTACACCACAGAGATTCGTGGTGAACAAATGCAAAT
GCTTGATTCGAACCGTCAGCAAGGTGAAGGTGTGCCAAGCGATAACGCTGGGTTTAACCAACCGCGTTTTAACAATAACC
AGAACAGTGGTTATGGCAATAACACGGGTTATAACAACAATAATAATAACCAAGGTTATGGCAACGCAGGCGGTTTTAAC
AATAATCAGGGCGGCGGTAACCAAGGTGGTTATGGCAACAATAATCCAGGTGGTTTTGCACCTAAGGCAGCTCCTTCTGC
ACCAGCACCTGCAGATTTGGATGATGATTTACCGTTCTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Glaesserella parasuis strain SC1401 |
49.749 |
100 |
0.497 |
| ssb | Vibrio cholerae strain A1552 |
55.725 |
65.829 |
0.367 |